HI,
I have a question about feat registration to standard space. I used the following line .
cd "$featdirectory" flirt -in example_func.nii -ref /autofs/../MNIref/MNI152_T1_1mm_brain.nii -out funcinstd_DUMMY -omat reg/example_func2standard.mat -dof 6
reg-feat2anat --feat "$featdirectory" --subject "$scructural"
To check the registration, reg-feat2anat --feat "$featdirectory" --manxfm func2std
When I checked the registration of functional and anatomical of the subject, it is very good. But the registration in standard space is not even close but completely wrong.
Is there any requirement for the cordination of example_func.nii ? Or other issue?
I appreciate any help & advice.
YUMI MAEDA