Re: [Freesurfer] mri_convert and image orientation

-- Daniel Yang, Ph.D. Yale Child Study Center E-mail: daniel.yj.yang@yale.edu On 1/26/16, 4:26 PM, "freesurfer-bounces@nmr.mgh.harvard.edu on behalf of Douglas N Greve" <freesurfer-bounces@nmr.mgh.harvard.edu on behalf of greve@nmr.mgh.harvard.edu> wrote: >If the determinant is less than 0, then it is radiological (probably it >will be radiological). > >On 01/26/2016 04:20 PM, Yang, Daniel wrote: >> Dear Doug, >> >> Thanks for your reply. Is it possible to upload the raw DICOM to a >>server >> so that you can see if mri_convert is making the orientation in the >>output >> NII file neurological? I just want to make sure what my image >>orientation >> is and how mri_convert interacts with it. >> >> Many thanks! >> Daniel >> >> > >-- >Douglas N. Greve, Ph.D. >MGH-NMR Center >greve@nmr.mgh.harvard.edu >Phone Number: 617-724-2358 >Fax: 617-726-7422 > >Bugs: surfer.nmr.mgh.harvard.edu/fswiki/BugReporting >FileDrop: https://gate.nmr.mgh.harvard.edu/filedrop2 >www.nmr.mgh.harvard.edu/facility/filedrop/index.html >Outgoing: ftp://surfer.nmr.mgh.harvard.edu/transfer/outgoing/flat/greve/ > >_______________________________________________ >Freesurfer mailing list >Freesurfer@nmr.mgh.harvard.edu >https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer > > >The information in this e-mail is intended only for the person to whom it >is >addressed. If you believe this e-mail was sent to you in error and the >e-mail >contains patient information, please contact the Partners Compliance >HelpLine at >https://urldefense.proofpoint.com/v2/url?u=http-3A__www.partners.org_compl >ianceline&d=AwIBAg&c=-dg2m7zWuuDZ0MUcV7Sdqw&r=vhD8z919MORXy6GkKdTAw3V58rxz >UZGOKpGXPDgqUHY&m=WLltv6OcAkXClyk0AkG4dpyu2SPQluAJ6oEiH94MutM&s=TD-7P7MmdH >yxRXXCDN_76DHGG7ZDDwckhxJfe-wp-cU&e= . If the e-mail was sent to you in >error >but does not contain patient information, please contact the sender and >properly >dispose of the e-mail. >