Thank you fore responding. I ran recon-all and it worked fine. however when i run bbregister i get an error "ERROR: cannot find /usr/lib/fsl/etc/flirtsch/xyztrans.sch". I have installed fsl 5.0 and FSLDIR set right i am running this in ubuntu 12.04 using freesurfer 5.3. am I doing some thing wrong thank you Aaron Tanenbaum
On Wed, Jul 10, 2013 at 11:34 AM, Douglas N Greve <greve@nmr.mgh.harvard.edu
wrote:
You will need to register your volume with the anatomical with bbregister. bbregister will take a "template" which should be the time point you used for motion correction. Then run mri_vol2surf to create a new data set sampled on the surface doug
On 07/10/2013 12:32 PM, Aaron Tanenbaum wrote:
Hola Freesurfers, I am new to Freesurfer and still learning the basics. I have been given a project and have not found a way to do it. Part of this task involves taking a 4dfp volume time series and convert it to a time series of a surface. This 4dfp I have is a statistical analysis mapped on to a specific atlas volume. Does anyone know of a way to do this. Any help will be highly appreciated. Gracias Aaron Tanenbaum
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