Hi Xiaomin
how did you edit wm.mgz? If within tkmedit (or "recon editing" in freeview) and you reran recon-all it should have preserved your edits, even though it regenerated the file. Have you checked?
Bruce
On Fri, 25 Jul 2014, Xiaomin Yue wrote:
Hi,
My edited wm.mgz was saved as wm.edited.mgz, then it copied to wm.mgz. I re-run the anlysis using recon-all -s cologna -autorecon2-wm. From some reason, the analysis regenerated wm.mgz from brain.mgz, which of course replaced my edited wm.mgz. Did I do some wrong here?
Thanks, Xiaomin