For what it is worth, this is the same thing that v8 generates (we just call it sTIV)
On 2/12/2025 9:47 AM, Iglesias Gonzalez, Juan E. wrote:
Dear Antonio,
NextBrain provides the ICV via SynthSeg 😉
Cheers,
/Eugenio
--
Juan Eugenio Iglesias
*From: *freesurfer-bounces@nmr.mgh.harvard.edu freesurfer-bounces@nmr.mgh.harvard.edu on behalf of Antonio Napolitano antonio.napolitano@gmx.com *Date: *Wednesday, February 12, 2025 at 2:42 PM *To: *freesurfer@nmr.mgh.harvard.edu freesurfer@nmr.mgh.harvard.edu *Subject: *[Freesurfer] histo atlas and sTIV
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Dear Freesurfer experts,
I have run nextbrain but I am not sure whether it is possible to have the sTIV.
Please, I would need to know how I can compute:
1) histo atlas segmentation with the newest version of Nextbrain along with segmentation-based total intracrainial volume (sTIV)
which commands shall I use? running all recon-all for that?
Thanks
Regards
Antonio
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