Hi Folks, I understand that control points should be used to fix errors due to bad skull stripping or intensity normalization (are there any other scenarios when one should use control points ?)
I followed the instructions on making corrections for issues due to intensity normalization. http://surfer.nmr.mgh.harvard.edu/fswiki/FsTutorial/ControlPoints
As I understand, one can fix issues due to intensity normalization either by using control points or editing wm.mgz. I would like to only edit wm.mgz and not use control points. Is this okay ? In your experience, are there situations, where this would be a bad idea ? Thanks Mehul ps: The motivation for this is that I want to use the longitudinal processing stream and I only want to edit the base and not edit the cross-sectional time-points.