Hi Sal - It looks like a problem with the spaces at the end of the lines of the bvecs file. If you remove those spaces, it should work. Thanks for bringing this to my attention - the row-formatted bvecs files are new in this version and I'll make sure to allow them to have spaces at the end of the lines in the future.
a.y
On Thu, 9 Jan 2014, Salil Soman wrote:
Hi,
I am re-running GE acquired 3T product DTI data which ran without trouble through the older tracula code. However, now when I run the code, the bvec file that gets generated has an extra 0 placed at the very end, and then trac-all -prep eventually fails because it complains the bvec and bvals files have non-matching number of entries. I do have the dorotbvecs option set to 1 (as I had before). Any suggestions on what I am doing incorrectly would be greatly appreciated. I have attached the bvec and bval files I am providing a input.
Best wishes,
Sal
Salil Soman, MD, MS Postdoctoral Research Fellow - Stanford Radiological Sciences Laboratory Fellow - Palo Alto War Related Illness and Injury Study Center WOC Neuroradiology Attending - Veterans Affairs Palo Alto Health Care System