Hi all,
I am working on a project that aims to:
(1) Use an MRI image, skullstrip and convert the brain volume to a surface
(2) Import that surface onto Matlab and visualize it there.
(3) On top of that surface in Matlab, add pictures of electrodes as well as 3D "heat maps" of neural activity.
It seems that FreeSurfer may be an option for me. I have a few questions that I have been unable to find the answers to:
(1) Can one visualize the surface created by FreeSurface in Matlab? If so, would somebody be able to point me to the documentation?
(2) Can one start the freesurfer from Matlab? It seems that the matlab files that come with freesurfer are more for reading and writing data rather than using/starting the freesurfer binaries.
Thanks for your help!
Best,
Raghav Raghav Puranmalka Candidate B.S. Engineering | Major: Bioengineering Candidate M.S. Engineering | Major: Bioengineering SEAS | University of Pennsylvania raghav.puranmalka@gmail.com