Dear Freesurfer,
I would like to test if the percentage change (two time points) of cortical thickness is different between two groups.
What i have done:
FIRST: long_stats_slopes --qdec ./qdec/long.qdec.table.dat --stats lh.aparc.stats --meas thickness --sd $SUBJECTS_DIR --do-spc --generic-time --stack-spc ./qdec/long.lh.aparc.stats.stack.txt
SECOND: mri_glmfit --osgm --glmdir lh_thickness.aparc-spc --table long.lh.aparc_thickness.stats.stack.txt
THIRD: cat lh_thickness.aparc-spc/sig.table.dat
Qesteions: 1. How do i test if there is a significant difference between the two groups? 2. How do i visualise this difference in FreeView?
Best regards Kasper Jessen