Hi FS team,
Sorry for these rather basic questions...
I'm not sure whether the gnumeric file is an ascii file (see mails below). Attached you'll find the file. It seems the case when you open it in the terminal screen that the nr's look fine (with command cat). However as soon as you type the command gnumeric and so on, it creates a wrong table from the start (see file attached). Can I somehow change this?
I have an additional question: I was looking at the Qdec info (tutorial) and I am not totally sure how to create the table.dat file... Where to get the volume measures from, if you'd like to include those? The statistical folder (where the tables are from)?
Thank you for responding in advance.
Kind regards, Caroline
-----Oorspronkelijk bericht----- Van: freesurfer-bounces@nmr.mgh.harvard.edumailto:freesurfer-bounces@nmr.mgh.harvard.edu [mailto:freesurfer-bounces@nmr.mgh.harvard.edu] Namens Douglas N Greve Verzonden: dinsdag 8 maart 2016 0:24 Aan: freesurfer@nmr.mgh.harvard.edumailto:freesurfer@nmr.mgh.harvard.edu Onderwerp: Re: [Freesurfer] mean thickness
the table file lh.aparc.thickness.table should be an ascii file. when you look at it with cat/more/less, what do you see? Can you send that table file?
On 03/07/2016 04:33 AM, Caroline Beelen wrote:
Hi Bruce,
I'm a beginner in FS, so I just followed tutorial instructions for generating the files carefully... I generated it by typing in for instance (after recon-all process was done): aparcstats2table --hemi lh --meas thickness --subjects A01_T1 A02_T1 etc... A10_T1 --tablefile lh.aparc.thickness.table followed by the command: gnumeric lh.aparc.thickness.table
It's a linux pc with Ubuntu 12.04 LTS (processor intel core i7-3770 CPU @ 3.4GHz x 8)
Attached the log file (A09).
Thank you very much!
Greetings, Caroline