no idea. If you want to use tbss, why not use FSL to do the dti analysis from the start?
On 2/26/19 10:27 AM, Daniel Callow wrote:
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Hello,
I am working through dt_recon troubleshooting (One subjects registration to anatomical is skewed leading to incorrect masking of that subjects FA image). I would like to use the dt_recon's FA outputs and input them into FSL's tbss pipeline. My question is are there any steps I should take converting or modifying the FA images so they are compatible with the tbss pipeline. My intention was to take the dt_recon fa or fa-masked into the tbss_1_preproc command?
Are there any considerations I should take into account?
Best *Daniel Callow* /PhD Student, Neuroscience and Cognitive Science/ Exercise for Brain Health Lab University of Maryland, College Park _ddcc2442@gmail.com mailto:ddcc2442@gmail.com_ 443-254-6298
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