External Email - Use Caution
Hi Bruce,
Already sent:
ftp> put 013.tar.gz local: 013.tar.gz remote: 013.tar.gz 200 PORT command successful. Consider using PASV. 150 Ok to send data. 226 Transfer complete. 223104380 bytes sent in 808.49 secs (269.4852 kB/s) ftp>
On Wed, Dec 12, 2018 at 1:39 PM Rosalia Dacosta Aguayo rdacostaa@gmail.com wrote:
Hi Bruce,
Thank you for your reply. I am sending now a file called 013.tar.gz via ftp. And this is not the worst...there are other with more regions that have not been considered in the segmentation process. I would like to know how could I cope with GM editions, as I am doing with control points with WM.
Yours sincerely, Rosalia
On Tue, Dec 11, 2018 at 5:17 PM Bruce Fischl fischl@nmr.mgh.harvard.edu wrote:
Hi Rosalia
if you upload an example with voxel coordinates of where you see problems we will take a look
cheers Bruce On Tue, 11 Dec 2018, Rosalia Dacosta Aguayo wrote:
External Email - Use CautionDear Free Surfer team and Bruce,
I have been doing well editing the skull stripping, and using control
points
to improve white matter segmentation. Furthermore, the few participants
I
had problems with due to large ventricles were solved using the flag you recommended me to use. I am very grateful for all your help.
However, I am facing another problem I thought I could solve using
control
points as well but this is worsening things instead of improving them. I refer to grey matter segmentation. I have found that several
participants,
more than I would like, are having problems with grey matter
segmentation in
the ventral temporal lobes and in the occipital lobe as well.
I wonder if you could kindly help me with this, telling me how I could
solve
this problem so GM and WM segmentation are fine.
Yours sincerely, Rosalia
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