Re: [Freesurfer] Editing masks

Hi Joshua

are you using the surfaces for this? If so, you shouldn't as they are undefined in those regions (since they have internal laminar structure that is different than what we expect). What are you trying to achieve?

cheers Bruce On Tue, 11 Jun 2013, Joshua deSouza wrote:

Hello all,

I am having a problem with generating values of the vertices at the hippocampal area. I believe it is a masking issue as reviewing the mask after the glmfit analysis I see that the mask does not cover the entire medial region excluding the corpus callosum. Can I do anything to change the mask as to add deeper brain regions at the hippocampal area?

Thank you

Joshua