Here it is. I tried changing the name to lh.pial_neo024.asc but there was the same segmentation error.
Thank you Bruce, Cheers, Tina
-----Original Message----- From: Bruce Fischl [mailto:fischl@nmr.mgh.harvard.edu] Sent: Friday, May 17, 2013 8:57 AM To: Tina Jeon Cc: Freesurfer@nmr.mgh.harvard.edu Subject: RE: [Freesurfer] conversion from ascii to surface
Hi Tina
can you send me the ascii file? Note that we assume in many places that the surface files start with a hemisphere specifier, so your output should probably be lh.neo024_2_pial or something like that. I doubt that's why it's crashing though Bruce On Fri, 17 May 2013, Tina Jeon wrote:
Dear Bruce,
Yes I have,
My input:
mris_convert ./neo024_2_lh.pial.asc ./neo024_2_lh.pial Segmentation fault
Can you lead me as to why there is an error?
Thank you,
Tina
-----Original Message----- From: Bruce Fischl [mailto:fischl@nmr.mgh.harvard.edu] Sent: Thursday, May 16, 2013 5:49 PM To: Tina Jeon Cc: Freesurfer@nmr.mgh.harvard.edu Subject: Re: [Freesurfer] conversion from ascii to surface
Hi Tina
try mris_convert
cheers Bruce On Thu, 16 May 2013, Tina Jeon wrote:
Dear Doug, Nick, and all,
I am trying to convert a surface from Amira to freesurfer in order to visualize a parcellated neonate brain. I have the freesurfer ascii files (white/pial) and need to convert those into surfaces that can be read by tksurfer.
Do you have any suggestions for how I could do the conversion?
Thank you in advance!
All the best
Tina Jeon
PhD Candidate
UT Southwestern Medical Center ‘14
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