Never mind, I noticed that higher up in the usage it shows the command with an underscore (e.g., --in_orientation). Just to note, the final para about orientation in the usage uses a dash, ie., --in-orientation.This command does not work. Cheers, A
Alex Fornito M.Psych/PhD (clin. neuro.) candidate Melbourne Neuropsychiatry Centre and Department of Psychology The University of Melbourne alexander.fornito@wh.org.au
-----Original Message----- From: Fornito, Alexander Sent: Tue 21/02/2006 9:38 AM To: freesurfer@nmr.mgh.harvard.edu Subject: mri_convert orientation
Hi, I'm trying to reorient some analyze files using mri_convert. The files are in LAS format and I'd like to get them in LPI format. i run the command below, but get the message: mri_convert: unknown flag "--in-orientation"
mri_convert -it analyze 1000001_lh_bound_gs -ot analyze ./1000001_lh_bound_gs_r.img --in-orientation LAS --out-orientation LPI
Any help is much appreciated! Thanks, Alex
Alex Fornito M.Psych/PhD (clin. neuro.) candidate Melbourne Neuropsychiatry Centre and Department of Psychology The University of Melbourne alexander.fornito@wh.org.au