Hi,
Thank you for reading this email !
I am a newbie to Medical Imaging, and am learning to use FreeSurfer for surface construction.
Already installed FreeSurfer in Ubuntu, and the installation has been verified to be 100% successful.
I got a bunch of data (coming in pairs of *.hdr and *.img), and I am trying to convert them to *.mgz files, so that I can use recon-all then.
but when I call mri_convert as follows:
mri_convert Rcing.img Rcing.mgz
I got the following error :
mri_convert Rcing.img Rcing.mgz $Id: mri_convert.c,v 1.166.2.2 2010/08/10 19:11:50 greve Exp $ reading from Rcing.img... ----------------------------------------------------------------- INFO: could not find /mnt/Data/Rcing.mat file for direction cosine info. INFO: use Analyze 7.5 hdr->hist.orient value: -40, . INFO: if not valid, please provide the information in /mnt/Data/Rcing.mat file ----------------------------------------------------------------- Segmentation fault
I have searched the freesurfer website ... no luck .... Would you mind to give me some advice or hints ? Thank you so much !
Best Tim