Re: [Freesurfer] wrong registration

Three things: 1. Make sure they are the same subject 2. Make sure they are not left-right reversed 3. Most likely it is that the initial registration failed. This is done with FSL. There are a couple of options: a. If the anat and dti were collected within the same session, you can try running bbregister with --regheader b. Inititialize with spm instead

doug

On 03/18/2013 04:16 PM, stdp82@virgilio.it wrote:

Hi list,

I'm noting that registration of DWI and T1 images for some subject is wrong (in the .mincost the first value is netx to 1.1).

Before recall new recon-all, trace-all .. what do you advise me?

Stefano

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