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Hello, When I threshold the new probabilistic maps amygdala subnuclei in MN152 space at a threshold of 0.8 I see that only 5 amygdala subnuclei survive (AAA, Basal nucleus, Corticoamygdaloid transition, Lateral nucleus, Accessory Basal nucleus). Is this perhaps overly strict threshold? Are there any general consensus guidelines for picking a reasonable threshold to use with these probabilistic maps? When I use a lower threshold of 0.35 there is still one nuclei that does not survive (medial nucleus).
Thank you!!
Location of maps: https://secure-web.cisco.com/1uhXMhTQwjvX1lxAZWJI1ov3nuo7OX-qQSRwkAXWXvSparn...
HippoAmygProbs.MNIsymSpace.right.nii.gz 2025-03-03 11:28:52 13506796 HippoAmygProbs.MNIsymSpace.names.txt 2025-02-28 15:52:58 581 HippoAmygProbs.MNIsymSpace.left.nii.gz 2025-02-28 18:02:02 13506619