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i receive this error when i try to run recon-all from my home directory on neurodebian:
anyone know what is causing this? thanks,
Iteration 1 Fri Jul 27 09:24:33 EDT 2018 nu_correct -clobber ./tmp.mri_nu_correct.mni.2638/nu0.mnc ./tmp.mri_nu_correct.mni.2638/nu1.mnc -tmpdir ./tmp.mri_nu_correct.mni.2638/0/ -iterations 1000 -distance 50 [brain@neurodebian:/home/brain/fstest/test1/mri/] [2018-07-27 09:24:33] running: /opt/minc/1.9.16/bin/nu_estimate_np_and_em -parzen -log -sharpen 0.15 0.01 -iterations 1000 -stop 0.001 -shrink 4 -auto_mask -nonotify -b_spline 1.0e-7 -distance 50 -quiet -execute -clobber -nokeeptmp -tmpdir ./tmp.mri_nu_correct.mni.2638/0/ ./tmp.mri_nu_correct.mni.2638/nu0.mnc ./tmp.mri_nu_correct.mni.2638/nu1.imp
/opt/minc/1.9.16/bin/volume_stats: /usr/lib/x86_64-linux-gnu/libstdc++.so.6: version `CXXABI_1.3.9' not found (required by /opt/minc/1.9.16/bin/volume_stats) nu_estimate_np_and_em: crashed while running volume_stats (termination status=256) nu_correct: crashed while running nu_estimate_np_and_em (termination status=256) ERROR: nu_correct Linux neurodebian 3.16.0-4-amd64 #1 SMP Debian 3.16.7-ckt9-3~deb8u1 (2015-04-24) x86_64 GNU/Linux
recon-all -s test1 exited with ERRORS at Fri Jul 27 09:24:33 EDT 2018
For more details, see the log file /home/brain/fstest/test1/scripts/recon-all.log To report a problem, see http://surfer.nmr.mgh.harvard.edu/fswiki/BugReporting