Hi Gabriel,
Have you tried mri_label2vol?
If you want the volume in the anatomical space:
mri_label2vol --label labelname.label --temp <T1_template>.nii.gz --identity --o volumename.nii.gz
If you want it in some other space, you can specify the registration matrix using --reg and the template using --temp.
Hope that helps, Priti
<div style="font-family: 'Times New Roman'; font-size: 16px; "><div>Hello FreeSurfers,</div><div><br /></div><div>Does any one of you know if exist a function to export labels as a ROI format?</div><div><br /></div><div>Regards,</div><div>Gabriel</div></div><div><br />-- <br /></div><div><font size="3">--------------------------<br />PhD. student Gabriel González-Escamilla<br />Laboratory of Functional Neuroscience<br />Department of Physiology, Anatomy, and Cell Biology<br />University Pablo de Olavide<br />Ctra. de Utrera, Km.1<br />41013 - Seville<br />- Spain -<br /><br />Email: ggonesc@upo.es<br />http://www.upo.es/neuroaging/es/</font></div> _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer