26 May
2011
26 May
'11
7:16 p.m.
Hey folks,
I am totally new to freesurfer, so please forgive me… I am trying to open up an atlas in freesurfer that is in 4dfp.ifh format (or nii, if you like). Can anyone tell me how?
Otherwise, I could try to reconstruct it straight from the T1 anatomical run, but when I try the following command, taken from the tutorial
recon-all -i Scan_0002_Img_0160_MR.1.3.12.2.1107.5.2.32.35139.2011042716283971836201295 -subject 106382 –all
I get errors at the nu_correct step, and it terminates. And I am running these commands in NX, if that makes any difference
Thank you in advance for your help!
David