Try using this instead lh.hippoAmygLabels-T1.v21.FSvoxelSpace.mgz
On 12/4/19 5:09 PM, Marcel Heers wrote:
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Dear all, (dear Eugenio),
I would like to use hippocampal subfields as masks for mri_segstats to retrieve intensity values. I am having problems loading the subfields file although it works fine with aseg.mgz.
Does anyone know the cause?
Thank you in advance!
Best regards Marcel
mri_segstats --seg $SUBJECTS_DIR/test/mri/aseg.mgz --ctab-default --sum output.txt --in $SUBJECTS_DIR/test/mri/T1.mgz
mri_segstats --seg $SUBJECTS_DIR/test/mri/lh.hippoAymgLabels-T1.v21.HBT.mgz --sum output.txt --in $SUBJECTS_DIR/test/mri/T1.mgz
ERROR: loading $SUBJECTS_DIR/test/mri/lh.hippoAymgLabels-T1.v21.HBT.mgz
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