Re: [Freesurfer] Question on freesurfer statistical values output

I'm using 4.4.0 (FS_stable) and not getting the '0', but just the missing sulci. Any idea why?

Thanks, Daniel

Alan Francis wrote:

Hi:

Are you using FS 4.0.3? This problem has been rectified in the later versions. I believe a '0' has been placed at the slot of the missing sulci in FS 4.3.0 and upwards.

best,

Alan

On Tue, Aug 31, 2010 at 10:13 AM, Daniel Goldberg <daniel@bwh.harvard.edu mailto:daniel@bwh.harvard.edu> wrote:

Hi,

I have processed about 50 subjects using freesurfer
(freesurfer_stable4.4.0). I'm now taking out the values for cortical
thickness from the STATS and have been noticing the following problem.
I'm opening the files /stats/lh.aparc.a2005s.stats and
/stats/rh.aparc.a2005s.stats. Those files should have 78 values of
cortical thickness for different areas of the brain, however in some
cases (half from those I have open so far) for the left hemisphere
(only
happening in the left hemisphere but not in the right so far)
there are
only 77 values and it is the "S_subcentral_ant" the value who is
missing
(completely missing from the list, not even a zero value assigned) in
all those cases.

Is this something that I should expect or is this an error/bug? At the
end of the recon-all-status.log file, it says it finished without
error.

Thanks,
Daniel
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