Hi Dov
sure, run your T1 through recon-all, then use bbregister to register whatever image(s) were used to manually label the tumor to the anatomicals and go from there
cheers Bruce On Mon, 8 Jul 2013, Dov Sadan wrote:
Hi all,
I Have MRI scans (T1/T2/Flair) with (manually) segmented tumors and I would like 2 use Freesurfer to estimate the brain locations of those Tumors. (I.e. What area of the brain "affected" by these tumors) .. Of course this is not for clinical use, but "research" -- Is this task possible with Freesurfer ? If so, how this can be done ?
Thanks, Dov [Please excuse me for my English...:]