Hi Anastasia
I think this hack was also added
## Steinar, steinar, commnet out this to fool the program to run under PBS ## date 20 april 2012 ## hack
#if ($?PBS_JOBID) then # echo "ERROR: Do not submit $ProgName as a job with pbsubmit or qsub." # echo "ERROR: Run it directly on the command line." # echo "ERROR: If run on the cluster, $ProgName will submit the jobs for you." # echo "ERROR: Each subject listed in your dmrirc will be submitted as a job." # exit 1 #endif
## end hack
Should I revert those changes? I changed to fsl_sub because the cluster I am using had my modifcation to fsl_sub. Should I change back?
Knut J
On 04/27/2012 05:06 PM, Anastasia Yendiki wrote:
Hi Knut - If I understand correctly, your modification was replacing "fsl_sub_seychelles" with "fsl_sub"?
a.y
On Fri, 27 Apr 2012, Knut J Bjuland wrote:
Hi
I am trying to run Trac-all on a cluster with PBS/torque. The trac-all scripts was modified to run with qsub, but the second stage in Trac-all crash without getting finished. This is tested with the tutorial data. I am enclosing the modified trac-all script.
Best regard
Knut J Bjuland NTNU
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