Dear all,
I've been trying to use "tksufer" to check the surface images according to the instruction of "Inspection of Freesurfer Oupt".
I could get the images, but the direction is opposite.
Like if I typed "tksurfer fsaverage lh inflated ", but I got the right one.
What may be wrong?
Thank you!
[root@server1 subjects]# tksurfer fsaverage lh inflated subject is fsaverage hemi is lh surface is inflated surfer: current subjects dir: /usr/local/freesurfer/subjects surfer: not in "scripts" dir ==> using cwd for session root surfer: session root data dir ($session) set to: surfer: /usr/local/freesurfer/subjects checking for nofix files in 'inflated' Reading image info (/usr/local/freesurfer/subjects/fsaverage) Reading /usr/local/freesurfer/subjects/fsaverage/mri/orig.mgz surfer: Reading header info from /usr/local/freesurfer/subjects/fsaverage/mri/orig.mgz surfer: vertices=163842, faces=327680 surfer: single buffered window surfer: tkoInitWindow(fsaverage) surfer: using interface /usr/local/freesurfer/tktools/tksurfer.tcl Reading /usr/local/freesurfer/tktools/tkm_common.tcl Reading /usr/local/freesurfer/tktools/tkm_wrappers.tcl Reading /usr/local/freesurfer/lib/tcl/fsgdfPlot.tcl Reading /usr/local/freesurfer/tktools/tkUtils.tcl Successfully parsed tksurfer.tcl reading white matter vertex locations... % surfer: loaded inflated into set 1 surfer: curvature read: min=-0.673989 max=0.540227
-- Wan