Hi Markus
that file translates indices/annotations into colors to display and human reasable names.
cheers Bruce On Fri, 13 Dec 2013, Markus Gschwind wrote:
I can precise the question, actually there are three:
ist the command correct?
mris_sample_parc -v -sdir subject001 rh ~/Documents/myROIfile.mgz rh.myROIfile.annot
I do not understand the meaning of this claimed file
cma_parcellation_colors.txt
Actually this does not exist. In the Wiki (http://surfer.nmr.mgh.harvard.edu/fswiki/mris_sample_parc) it says that there was an optional arguement
-file <filename>
use <filename> as translation (default: 'cma_parcellation_colors.txt')
If I understand correctly, "translation" points ot a problem of different spaces, but the filename rather seems something like a parcellation/atlas color table?
- The result of this problem seems to be that I cannot annotate the surface
using the created annotation file. It gives this error, which i do not understand.
CTABfindAnnotation: ct was NULL No such file or directory CTABfindAnnotation: ct was NULL No such file or directory CTABfindAnnotation: ct was NULL No such file or directory CTABfindAnnotation: ct was NULL No such file or directory ... etc.
Can anyone help me find the problem?
Thank you in advance!
Markus