Hi Martin,
when you say one subcortical segmentation, do you mean from raw data to an aseg.mgz? If so, I would think 6 hours is an underestimate, although it depends on the anatomy. I don't think we run in 4 hours on anything.
We are still working towards an open-source release, but have no plans internally to do much parallelization, although in principle many of the compute-intensive steps could be parallelized.
cheers, Bruce
On Sun, 4 Mar 2007, Martin Kavec wrote:
Hi,
anybody knows, how long does it take to run one subcortical segmentation on a MacPro? It take about 6 hours on my MacBook Pro, so I would expect it should finish faster on the workstation. Could anybody suggest me a hardware configuration, on which it could be about 4 hours?
Last question, is/can be/will be the freesurfer's code parallelized?
Thanks in advance,
Martin