Thanks for the quick reply. Can you elaborate a little bit how to use mri_vol2vol to get what I want? what would be the final scipt for tkmedit then?
On Tue, Mar 5, 2013 at 5:31 PM, Bruce Fischl fischl@nmr.mgh.harvard.eduwrote:
Hi Natalie
sorry, tkmedit won't do what you want. It's old and we are not developing it anymore. You can apply the transform using mri_vol2vol, just make sure to use nearest nbr interp for the aseg.
cheers Bruce
On Tue, 5 Mar 2013, Natalie Han wrote:
Hi, all,
I have a tkmedit display issue when I try to add transformation to the main volume, but the segmentation volume won't conform to Talairach domain accordingly. Here is the commandline
tkmedit subject norm.mgz -main-transform talairach.xfm -seg aseg.mgz
really appreciate any feedback on how to add transformation on this segmentation results.
Thanks. Natalie
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