Thanks for the help. We don't have matlab here in our lab, but we do have R. Is there a way to use R and get the same desired result?
On 11/28/11 11:46 AM, "Bruce Fischl" fischl@nmr.mgh.harvard.edu wrote:
Hi Brian,
I guess you can use read_annotation.m in matlab and set every vertex within the given parcellation to the value you specify below, then write it out as either an nvertices x 1 x 1 .mgz file with save_mgh, or use write_curv.m
cheers Bruce
On Mon, 28 Nov 2011, Weisinger, Brian (NIH/NIMH) [F] wrote:
hello
we are trying to project a vector of results for segmented cortical regions (i.e., ... "lh_middletemporal_thickness" 0.000757119 "rh_middletemporal_thickness" 8.06E-05 "lh_parahippocampal_thickness" -0.000510407 "rh_parahippocampal_thickness" 0.000625997 "lh_pericalcarine_thickness" 0.000499749 "rh_pericalcarine_thickness" 0.000903678 "lh_superiortemporal_thickness" 0.001732855 "rh_superiortemporal_thickness" 0.000184256 "lh_temporalpole_thickness" 0.001075362 "rh_temporalpole_thickness" -0.000381165 "lh_transversetemporal_thickness" 0.000558122 "rh_transversetemporal_thickness" 6.65E-05 ...)
however, we are unsure of how to do this. so, our question is? what is the sequence of steps we need to take to visualize our results on the segmented 3D template in tksurfer.
Thanks for your help,
Brian Weisinger
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