Following Yuan-Fen Kuo¹s suggestion, I added a # at line 275 in recon-all. Recon-all stage1 now proceeds until it crashes with the following:
Intensity Normalization Tue Aug 30 12:47:03 CDT 2005 /Users/Shared/freesurfer/subjects/00139/mri mri_normalize orig.mgz T1.mgz reading from orig.mgz... normalizing image... talairach transform 1.131 -0.045 -0.066 0.052; 0.052 1.009 0.210 -10.266; 0.056 -0.234 1.111 -12.367; 0.000 0.000 0.000 1.000; INFO: Modifying talairach volume c_(r,a,s) based on average_305 building Voronoi diagram... performing soap bubble smoothing... 3d normalization pass 1 of 2 Bus error ERROR: mri_normalize exited with non-zero status recon-all exited with errors at Tue Aug 30 12:48:33 CDT 2005
Any suggestions on proceeding?
------------------ Clifford Smith, PhD Assistant Professor of Behavioral Sciences Rush University Medical Center 312.942.2893