Dear list,
Sorry to repost it again, but i had rechecked it and found that all the directories have no permission problems, but qdec could not load this CSD file. Not sure why it is like this.
Thank you for the help again!
natalia
On Tue, Jul 10, 2012 at 3:20 PM, Natalia h natalia.himalaya@gmail.comwrote:
Dear expert,
I got an error while clicking the Monte Carlo simulation in qdec. I am using Mac 10.6 and qdec version 1.4, freesufer 5.1
Have no clue why it always gives this error in the terminal:
mri_surfcluster --in /Longitudinal_template2/qdec/lh-thick-rate-10mm-group/lh-Avg-Intercept-long.thickness-rate/sig.mgh --csd /Applications/freesurfer/average/mult-comp-cor/fsaverage/lh/cortex/fwhm9/abs/th20/mc-z.csd --mask /Longitudinal_template2/qdec/lh-thick-rate-10mm-group/mask.mgh --cwsig /Longitudinal_template2/qdec/lh-thick-rate-10mm-group/lh-Avg-Intercept-long.thickness-rate/mc-z.abs.th20.sig.cluster.mgh --vwsig /Longitudinal_template2/qdec/lh-thick-rate-10mm-group/lh-Avg-Intercept-long.thickness-rate/mc-z.abs.th20.sig.vertex.mgh --sum /Longitudinal_template2/qdec/lh-thick-rate-10mm-group/lh-Avg-Intercept-long.thickness-rate/mc-z.abs.th20.sig.cluster.summary --ocn /Longitudinal_template2/qdec/lh-thick-rate-10mm-group/lh-Avg-Intercept-long.thickness-rate/mc-z.abs.th20.sig.ocn.mgh --oannot /Longitudinal_template2/qdec/lh-thick-rate-10mm-group/lh-Avg-Intercept-long.thickness-rate/mc-z.abs.th20.sig.ocn.annot --csdpdf /Longitudinal_template2/qdec/lh-thick-rate-10mm-group/lh-Avg-Intercept-long.thickness-rate/mc-z.abs.th20.pdf.dat --annot aparc --cwpvalthresh 0.05 --surf white
ERROR: CSDread(): could not open /Applications/freesurfer/average/mult-comp-cor/fsaverage/lh/cortex/fwhm9/abs/th20/mc-z.csd
ERROR!
Very appreciate for the help !
Thank you in advance,
Natalia