15 Jun
2020
15 Jun
'20
10:35 a.m.
I would start by looking at the ?h.orig.nofix surface on the wm.mgz and brain.finalsurfs.mgz and look around for some big defect (eg, cerebellum or error in skull stripping)
https://surfer.nmr.mgh.harvard.edu/fswiki/FsTutorial/TopologicalDefect_freev...
On 6/15/2020 4:31 AM, KennethSPrice wrote:
External Email - Use Caution
Hello freesurfers,
I am running recon-all on one of my subjects and it is hanging on a defect. How do I examine the reason it is hanging? Freeview the defect? Any help would be appreciated.
Thanks, Ken
Sent with ProtonMail https://protonmail.com Secure Email.
Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer