No, there are not, just make sure that the nifti itself is accurate. Garbage in, garbage out.
doug
Narly A Golestani wrote:
Hello everyone,
I would like to know if there are left-right orientation issues when converting images from nifti format to the mgz format. I suspect not as nifti, unlike analyze, contains the left-right information in the file itself. But I would like to make sure that there are not issues such as the ones reported with going through analyze, such those reported here:
http://www.mail-archive.com/freesurfer@nmr.mgh.harvard.edu/msg09329.html
thanks in advance! best wishes, Narly. _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer