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Writing masked volume to brain.finalsurfs.mgz...done. @#@FSTIME 2023:06:28:16:19:10 mri_mask N 5 e 0.51 S 0.01 U 0.44 P 89% M 74240 F 0 R 2972 W 0 c 3 w 760 I 0 O 0 L 0.13 0.04 0.01 @#@FSLOADPOST 2023:06:28:16:19:11 mri_mask N 5 0.13 0.04 0.01 #-------------------------------------------- #@# Fill Wed Jun 28 16:19:11 PDT 2023 /mnt/c/Users/BigBrain/documents/Subjects/sub-049/mri
mri_fill -a ../scripts/ponscc.cut.log -xform transforms/talairach.lta -segmentation aseg.presurf.mgz -ctab /usr/local/freesurfer/7.2.0/SubCorticalMassLUT.txt -auto-man filled.auto.mgz filled.mgz ../tmp/filled.edits.txt wm.mgz filled.mgz
logging cutting plane coordinates to ../scripts/ponscc.cut.log... INFO: Using transforms/talairach.lta and its offset for Talairach volume ... using segmentation aseg.presurf.mgz... error: volume size must be greater than 0 in every dimension Command exited with non-zero status 1
The error implies aseg.presurf.mgz or talairach.lta have a 0 dimension, but neither do. mri_info for aseg.presurf is below, I've attached the log and talairach.lta files:
bigbrain@DESKTOP-EDQPTKK:/mnt/c/Users/BigBrain/Documents/Subjects/sub-049/mri$ mri_info aseg.presurf.mgz Volume information for aseg.presurf.mgz type: MGH dimensions: 256 x 256 x 256