What's in T1-neuromag/slices? What version are you using?
SHRIKANTH KULASHEKHAR wrote:
Hi all,
When I attempt to create a high-resolution head surface tessellation using mkheadsurf, I end up with the following errors:
For " mkheadsurf -subjid xxx" the error: cannot find volume T1 for xxx
or for
[root@localhost bem]# mkheadsurf -subjid xxx -srcvol T1-neuromag/slices INFO: log file is /usr/local/freesurfer/subjects/xxx/scripts/mkheadsurf.log
Wed May 6 01:03:46 EEST 2009 /usr/local/freesurfer/subjects/xxx/bem mri_seghead --invol /usr/local/freesurfer/subjects/xxx/mri/T1-neuromag/slices --outvol /usr/local/freesurfer/subjects/xxx/mri/seghead --fill 255 --thresh1 20
--thresh2 20 --nhitsmin 2
input volume: /usr/local/freesurfer/subjects/xxx/mri/T1-neuromag/slices output volume: /usr/local/freesurfer/subjects/xxx/mri/seghead threshold1: 20 threshold2: 20 nhitsmin: 2 fill value: 255 Loading input volume corRead(): can't open file /usr/local/freesurfer/subjects/xxx/mri/T1-neuromag/slices/COR-.info ERROR: could not read /usr/local/freesurfer/subjects/xxx/mri/T1-neuromag/slices ERROR: mri_seghead
Any advice on what could be wrong ?
Thanks in advance
shriks
Explore and discover exciting holidays and getaways with Yahoo! India Travel Click here!
http://in.rd.yahoo.com/tagline_Travel_1/*http://in.travel.yahoo.com/
Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer