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Hi.
I have a quetion about thalamic nuclei segmentation process in freesurfer v7. Now, I’ve got a large amounts of patients samples which were already pre-processed using “recon -all” pipeline in freesurfer version 6, but I want to know their specific volumes of thalamic nucleis or subsegmentations using freesufer 7.
So, due to a quite large number of samples, I feel that it will take a very long time to do preprocessing again in freesurfer 7 and , if possible, without re-pre-processing in freesurfer v7.0, I’d like to do additional subsegmentation of thalamus as well as hippoamygdala.
So I’ like to ask if these kinds of thalmic nuclei subsegmentaion or Hippo-amygdala subsegmentation which was newly-introduced in freesurfer 7.0, can be done using data which was pre-processed in freesurfer 6.0 already.
(Is it possible to do thalamic segmentaiton using segmentThalamic nuclei pipeline in freesurfer 7 for the data already pre-processed in freesufer 6.0 ? ) and I am also very curious if their results will be different from the results which was made using only freesurfer v7 from pre-precessing?
Best, H Roh.