Re: [Freesurfer] setting thresholds in qdec

-- Michael Harms, Ph.D. ----------------------------------------------------------- Conte Center for the Neuroscience of Mental Disorders Washington University School of Medicine Department of Psychiatry, Box 8134 660 South Euclid Ave. Tel: 314-747-6173 St. Louis, MO 63110 Email: mharms@wustl.edu On 4/14/13 4:18 PM, "Nick Schmansky" nicks@nmr.mgh.harvard.edu wrote: >Mike, > >We dont have a RHEL 5.9 system to replicate the issue. However, I did >find a bug in qdec where the 'Min' value in the Threshold settings would >not update the display when a value was entered. This bug was >introduced when the 'Mid' value was removed (which is why I think the >v5.1 qdec works). > >A fixed version of qdec.bin for linux is available here: >ftp://surfer.nmr.mgh.harvard.edu/pub/dist/freesurfer/misc/linux-centos4_x8 >6_64/ > >Nick > > >On Fri, 2013-04-12 at 12:20 -0500, Michael Harms wrote: >> >> >> I just transferred all the data to a different system running CentOS >> 5.5 and I'm able to set the display thresholds in qdec on that >> system. It also uses a different FS version (5.1) but I think it is >> an OS issue, and not a FS version issue, since I have the same problem >> on the original RHEL 5.9 system using the qdec in FS 5.1 as well. >> >> >> So, must be something about the libraries qdec uses not quite playing >> nice in RHEL 5.9 ? >> >> >> thanks, >> -MH >> >> >> -- >> Michael Harms, Ph.D. >> ----------------------------------------------------------- >> Conte Center for the Neuroscience of Mental Disorders >> Washington University School of Medicine >> Department of Psychiatry, Box 8134 >> 660 South Euclid Ave. Tel: 314-747-6173 >> St. Louis, MO 63110 Email: mharms@wustl.edu >> >> >> From: Michael Harms mharms@conte.wustl.edu >> Date: Friday, April 12, 2013 11:32 AM >> To: "freesurfer@nmr.mgh.harvard.edu" freesurfer@nmr.mgh.harvard.edu >> Subject: [Freesurfer] setting thresholds in qdec >> >> >> >> >> >> Hello, >> Is it no longer possible to set the Min, Mid, and Max thresholds >> directly on the Qdec display tab? >> The only way I seem to be able to change them is via the sliders in >> the histogram at the bottom, which I don't recall previously being the >> case. >> This is Qdec 1.4 (FS 5.2) on a RHEL 5.9 system using >> freesurfer-Linux-centos4_x86_64-stable-pub-v5.2.0 distribution. >> >> >> I can't change the FDR "Rate" either. >> >> >> thanks, >> -MH >> >> >> -- >> Michael Harms, Ph.D. >> ----------------------------------------------------------- >> Conte Center for the Neuroscience of Mental Disorders >> Washington University School of Medicine >> Department of Psychiatry, Box 8134 >> 660 South Euclid Ave. Tel: 314-747-6173 >> St. Louis, MO 63110 Email: mharms@wustl.edu >> _______________________________________________ Freesurfer mailing >> list Freesurfer@nmr.mgh.harvard.edu >> https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer The >> information in this e-mail is intended only for the person to whom it >> is addressed. If you believe this e-mail was sent to you in error and >> the e-mail contains patient information, please contact the Partners >> Compliance HelpLine at http://www.partners.org/complianceline . If the >> e-mail was sent to you in error but does not contain patient >> information, please contact the sender and properly dispose of the >> e-mail. >> _______________________________________________ >> Freesurfer mailing list >> Freesurfer@nmr.mgh.harvard.edu >> https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer > > >_______________________________________________ >Freesurfer mailing list >Freesurfer@nmr.mgh.harvard.edu >https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer