Hi John
I do not know anything about the error that you are getting but I was also having some problems with tksurfer and was told by Dr. Fischl that this viewer is no longer being updated and that it would be best to try freeview. Did you give this a go?
best wishes
Trisanna
-- Ph.D. Candidate McGill University Integrated Program in Neuroscience Psychology
On Wed, Mar 16, 2016 at 9:43 AM, John Anderson j.anderson@publicist.com wrote:
Dear experts, I am running into a trouble visualizing my data in tksurfer. I highly appreciate any advice that can help! I ran group analysis between two groups using GLM analysis (mri_glmfit) and I corrected the results for multiple comparison using (mri_glmfit-sim), then I ran this command to visualize the results:
tksurfer fsaverage lh inflated -overlay cache.th13.pos.sig.cluster.mgh
The result attached. In my summary file I see that I have significant differnce only in the precentral gyrus. But the results in tksurger is not showing precentral gyrus. I tried to play with the thresholds and nothing changed.
Any advice is highly appreciated!! Bests, John
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