Hi Stefano - Are the original bvecs (that you specify in your configuration file) arranged in 3 rows or 3 columns?
a.y
On Thu, 31 Jan 2013, stdp82@virgilio.it wrote:
Hi list, I'm running trac-all -prep -c
but I have this error
dtifit -k /Applications/freesurfer/subjects/subject_prova/Diff01/dmri/dwi.nii.gz -m /Applications/freesurfer/subjects/subject_prova/Diff01/dlabel/diff/lowb_brain_mask.nii.gz -r /Applications/freesurfer/subjects/subject_prova/Diff01/dmri/bvecs -b /Applications/freesurfer/subjects/subject_prova/Diff01/dmri/bvals -o /Applications/freesurfer/subjects/subject_prova/Diff01/dmri/dtifit Error: bvecs and bvals don't have the same number of entries
I'm noting that my original bvecs are
0 -0.460 -0.539 0.490 -0.071 0.226 0.463 0.483 -0.643 0.468 -0.730 -0.707 -0.318 0.175 0.488 0.460 0 -0.395 -0.588 -0.706 -0.605 -0.607 -0.236 -0.180 -0.464 -0.562 -0.337 -0.699 -0.786 -0.786 -0.712 -0.301 0 -0.795 0.419 -0.057 -0.793 -0.725 -0.708 -0.695 -0.609 0.333 0.413 -0.108 0.368 0.392 -0.004 0.476
and in dmri
0 0 0
bvals conversion is ok. What's happen? Why are there an error about conversion to FSL format?
Thank you very much, I really appreciate your patience.
Stefano