Hi,
I am attempting to work with volume data for the first time and trying to figure out how to control what temporal offset is shown in the functional overlay. I checked the options, the wiki, etc, but didn't find anything yet. That is most like because I'm looking at old data that was generated in a way that is incompatible (it seems) with newer versions, so I am sourcing stable2.
The command that originally generated the group comparison I am viewing is intergroupavg-sess -analysis EMerror -contrast ASevASc -group1 BwGroupNormalsError5 -group2 BwGroupAspError5 -intergroup BwGroupError5 -space tal -spacedir tal This is the path to the resulting group comparison /space/balagula/8/users/EMexec/fMRI/GROUP_ANALYSIS/BwGroupError5/bold/EMerror/tal-rfx/ASevASc/ To view it I am running: tkmedit-sess -analysis EMerror -contrast ASevASc -space tal -map minsig -s BwGroupError5 -isxavg random -fthresh 1.3
My environment looks like: FREESURFER_HOME /usr/local/freesurfer/stable2 FSFAST_HOME /usr/local/freesurfer/stable2/fsfast SUBJECTS_DIR /space/ventzl/1/users/SUBJECTS_DIR FUNCTIONALS_DIR /usr/local/freesurfer/stable2/sessions MINC_BIN_DIR /usr/pubsw/packages/mni/current/bin MINC_LIB_DIR /usr/pubsw/packages/mni/current/lib PERL5LIB /usr/pubsw/packages/mni/current/lib/perl5/5.8.5 GSL_DIR /usr/pubsw/packages/gsl/current QTDIR /usr/pubsw/packages/qt/current TCLLIBPATH /usr/local/freesurfer/stable2/lib/tcltktixblt/lib FSL_DIR /usr/pubsw/packages/fsl/current
Thanks for any advice, Rob