Are you running this with only one subject? What are you trying to do? The purpose of this step is to combine measures from multiple subjects.
On Fri, 27 Dec 2013, stdp82@virgilio.it wrote:
I'm sorry and I'm attaching the files.Thanks,
Stefano
trac-all -stat -c $FREESURFER_HOME/Control01 INFO: SUBJECTS_DIR is /Applications/freesurfer/subjects/subject_prova INFO: Diffusion root is /Applications/freesurfer/subjects/subject_prova Actual FREESURFER_HOME /Applications/freesurfer /Applications/freesurfer/bin/dmri_group --list /Applications/freesurfer/subjects/subject_prova/stats/lh.cst_AS.avg33_mni_flt.inputs.txt --ref /usr/local/fsl/data/standard/MNI152_T1_1mm_brain.nii.gz --out /Applications/freesurfer/subjects/subject_prova/stats/lh.cst_AS.avg33_mni_flt
cwd /Applications/freesurfer/subjects/subject_prova cmdline /Applications/freesurfer/bin/dmri_group --list /Applications/freesurfer/subjects/subject_prova/stats/lh.cst_AS.avg33_mni_flt.inputs.txt --ref /usr/local/fsl/data/standard/MNI152_T1_1mm_brain.nii.gz --out /Applications/freesurfer/subjects/subject_prova/stats/lh.cst_AS.avg33_mni_flt sysname Darwin hostname iMac-di-Stefano.local machine x86_64 user Stefano Base name of output files: /Applications/freesurfer/subjects/subject_prova/stats/lh.cst_AS.avg33_mni_flt Text file with list of individual inputs: /Applications/freesurfer/subjects/subject_prova/stats/lh.cst_AS.avg33_mni_flt.inputs.txt Loading output reference volume from /usr/local/fsl/data/standard/MNI152_T1_1mm_brain.nii.gz Loading list of inputs from /Applications/freesurfer/subjects/subject_prova/stats/lh.cst_AS.avg33_mni_flt.inputs.txt Loading measures along the path from/Applications/freesurfer/subjects/subject_prova/Control01/dpath/lh.cst_AS_avg33_mni_flt/pathstats .byvoxel.txt Loading input reference volume from /Applications/freesurfer/subjects/subject_prova/Control01/dmri/dtifit_FA.nii.gz Loading affine registration from /Applications/freesurfer/subjects/subject_prova/Control01/dmri/xfms/diff2mni.flt.mat INFO: Sampling interval along path is 2.6465 voxels Writing mean path to /Applications/freesurfer/subjects/subject_prova/stats/lh.cst_AS.avg33_mni_flt.mean.txt Writing group table to /Applications/freesurfer/subjects/subject_prova/stats/lh.cst_AS.avg33_mni_flt.AD.txt Writing group table to /Applications/freesurfer/subjects/subject_prova/stats/lh.cst_AS.avg33_mni_flt.RD.txt Writing group table to /Applications/freesurfer/subjects/subject_prova/stats/lh.cst_AS.avg33_mni_flt.MD.txt Writing group table to /Applications/freesurfer/subjects/subject_prova/stats/lh.cst_AS.avg33_mni_flt.FA.txt Writing group table to /Applications/freesurfer/subjects/subject_prova/stats/lh.cst_AS.avg33_mni_flt.AD_Avg.txt Writing group table to /Applications/freesurfer/subjects/subject_prova/stats/lh.cst_AS.avg33_mni_flt.RD_Avg.txt Writing group table to /Applications/freesurfer/subjects/subject_prova/stats/lh.cst_AS.avg33_mni_flt.MD_Avg.txt Writing group table to /Applications/freesurfer/subjects/subject_prova/stats/lh.cst_AS.avg33_mni_flt.FA_Avg.txt Done in 0.799 sec. dmri_group done /Applications/freesurfer/bin/dmri_group --list /Applications/freesurfer/subjects/subject_prova/stats/rh.cst_AS.avg33_mni_flt.inputs.txt --ref /usr/local/fsl/data/standard/MNI152_T1_1mm_brain.nii.gz --out /Applications/freesurfer/subjects/subject_prova/stats/rh.cst_AS.avg33_mni_flt
cwd /Applications/freesurfer/subjects/subject_prova cmdline /Applications/freesurfer/bin/dmri_group --list /Applications/freesurfer/subjects/subject_prova/stats/rh.cst_AS.avg33_mni_flt.inputs.txt --ref /usr/local/fsl/data/standard/MNI152_T1_1mm_brain.nii.gz --out /Applications/freesurfer/subjects/subject_prova/stats/rh.cst_AS.avg33_mni_flt sysname Darwin hostname iMac-di-Stefano.local machine x86_64 user Stefano Base name of output files: /Applications/freesurfer/subjects/subject_prova/stats/rh.cst_AS.avg33_mni_flt Text file with list of individual inputs: /Applications/freesurfer/subjects/subject_prova/stats/rh.cst_AS.avg33_mni_flt.inputs.txt Loading output reference volume from /usr/local/fsl/data/standard/MNI152_T1_1mm_brain.nii.gz Loading list of inputs from /Applications/freesurfer/subjects/subject_prova/stats/rh.cst_AS.avg33_mni_flt.inputs.txt Loading measures along the path from/Applications/freesurfer/subjects/subject_prova/Control01/dpath/rh.cst_AS_avg33_mni_flt/pathstats .byvoxel.txt Loading input reference volume from /Applications/freesurfer/subjects/subject_prova/Control01/dmri/dtifit_FA.nii.gz Loading affine registration from /Applications/freesurfer/subjects/subject_prova/Control01/dmri/xfms/diff2mni.flt.mat INFO: Sampling interval along path is 2.63906 voxels Writing mean path to /Applications/freesurfer/subjects/subject_prova/stats/rh.cst_AS.avg33_mni_flt.mean.txt Writing group table to /Applications/freesurfer/subjects/subject_prova/stats/rh.cst_AS.avg33_mni_flt.AD.txt Writing group table to /Applications/freesurfer/subjects/subject_prova/stats/rh.cst_AS.avg33_mni_flt.RD.txt Writing group table to /Applications/freesurfer/subjects/subject_prova/stats/rh.cst_AS.avg33_mni_flt.MD.txt Writing group table to /Applications/freesurfer/subjects/subject_prova/stats/rh.cst_AS.avg33_mni_flt.FA.txt Writing group table to /Applications/freesurfer/subjects/subject_prova/stats/rh.cst_AS.avg33_mni_flt.AD_Avg.txt Writing group table to /Applications/freesurfer/subjects/subject_prova/stats/rh.cst_AS.avg33_mni_flt.RD_Avg.txt Writing group table to /Applications/freesurfer/subjects/subject_prova/stats/rh.cst_AS.avg33_mni_flt.MD_Avg.txt Writing group table to /Applications/freesurfer/subjects/subject_prova/stats/rh.cst_AS.avg33_mni_flt.FA_Avg.txt Done in 0.317 sec. dmri_group done /Applications/freesurfer/bin/dmri_group --list /Applications/freesurfer/subjects/subject_prova/stats/lh.ilf_AS.avg33_mni_flt.inputs.txt --ref /usr/local/fsl/data/standard/MNI152_T1_1mm_brain.nii.gz --out /Applications/freesurfer/subjects/subject_prova/stats/lh.ilf_AS.avg33_mni_flt
cwd /Applications/freesurfer/subjects/subject_prova cmdline /Applications/freesurfer/bin/dmri_group --list /Applications/freesurfer/subjects/subject_prova/stats/lh.ilf_AS.avg33_mni_flt.inputs.txt --ref /usr/local/fsl/data/standard/MNI152_T1_1mm_brain.nii.gz --out /Applications/freesurfer/subjects/subject_prova/stats/lh.ilf_AS.avg33_mni_flt sysname Darwin hostname iMac-di-Stefano.local machine x86_64 user Stefano Base name of output files: /Applications/freesurfer/subjects/subject_prova/stats/lh.ilf_AS.avg33_mni_flt Text file with list of individual inputs: /Applications/freesurfer/subjects/subject_prova/stats/lh.ilf_AS.avg33_mni_flt.inputs.txt Loading output reference volume from /usr/local/fsl/data/standard/MNI152_T1_1mm_brain.nii.gz Loading list of inputs from /Applications/freesurfer/subjects/subject_prova/stats/lh.ilf_AS.avg33_mni_flt.inputs.txt Loading measures along the path from/Applications/freesurfer/subjects/subject_prova/Control01/dpath/lh.ilf_AS_avg33_mni_flt/pathstats .byvoxel.txt Loading input reference volume from /Applications/freesurfer/subjects/subject_prova/Control01/dmri/dtifit_FA.nii.gz Loading affine registration from /Applications/freesurfer/subjects/subject_prova/Control01/dmri/xfms/diff2mni.flt.mat INFO: Sampling interval along path is 2.21324 voxels Writing mean path to /Applications/freesurfer/subjects/subject_prova/stats/lh.ilf_AS.avg33_mni_flt.mean.txt Writing group table to /Applications/freesurfer/subjects/subject_prova/stats/lh.ilf_AS.avg33_mni_flt.AD.txt Writing group table to /Applications/freesurfer/subjects/subject_prova/stats/lh.ilf_AS.avg33_mni_flt.RD.txt Writing group table to /Applications/freesurfer/subjects/subject_prova/stats/lh.ilf_AS.avg33_mni_flt.MD.txt Writing group table to /Applications/freesurfer/subjects/subject_prova/stats/lh.ilf_AS.avg33_mni_flt.FA.txt Writing group table to /Applications/freesurfer/subjects/subject_prova/stats/lh.ilf_AS.avg33_mni_flt.AD_Avg.txt Writing group table to /Applications/freesurfer/subjects/subject_prova/stats/lh.ilf_AS.avg33_mni_flt.RD_Avg.txt Writing group table to /Applications/freesurfer/subjects/subject_prova/stats/lh.ilf_AS.avg33_mni_flt.MD_Avg.txt Writing group table to /Applications/freesurfer/subjects/subject_prova/stats/lh.ilf_AS.avg33_mni_flt.FA_Avg.txt Done in 0.307 sec. dmri_group done /Applications/freesurfer/bin/dmri_group --list /Applications/freesurfer/subjects/subject_prova/stats/rh.ilf_AS.avg33_mni_flt.inputs.txt --ref /usr/local/fsl/data/standard/MNI152_T1_1mm_brain.nii.gz --out /Applications/freesurfer/subjects/subject_prova/stats/rh.ilf_AS.avg33_mni_flt
cwd /Applications/freesurfer/subjects/subject_prova cmdline /Applications/freesurfer/bin/dmri_group --list /Applications/freesurfer/subjects/subject_prova/stats/rh.ilf_AS.avg33_mni_flt.inputs.txt --ref /usr/local/fsl/data/standard/MNI152_T1_1mm_brain.nii.gz --out /Applications/freesurfer/subjects/subject_prova/stats/rh.ilf_AS.avg33_mni_flt sysname Darwin hostname iMac-di-Stefano.local machine x86_64 user Stefano Base name of output files: /Applications/freesurfer/subjects/subject_prova/stats/rh.ilf_AS.avg33_mni_flt Text file with list of individual inputs: /Applications/freesurfer/subjects/subject_prova/stats/rh.ilf_AS.avg33_mni_flt.inputs.txt Loading output reference volume from /usr/local/fsl/data/standard/MNI152_T1_1mm_brain.nii.gz Loading list of inputs from /Applications/freesurfer/subjects/subject_prova/stats/rh.ilf_AS.avg33_mni_flt.inputs.txt Loading measures along the path from/Applications/freesurfer/subjects/subject_prova/Control01/dpath/rh.ilf_AS_avg33_mni_flt/pathstats .byvoxel.txt Loading input reference volume from /Applications/freesurfer/subjects/subject_prova/Control01/dmri/dtifit_FA.nii.gz Loading affine registration from /Applications/freesurfer/subjects/subject_prova/Control01/dmri/xfms/diff2mni.flt.mat INFO: Sampling interval along path is 2.10424 voxels Writing mean path to /Applications/freesurfer/subjects/subject_prova/stats/rh.ilf_AS.avg33_mni_flt.mean.txt Writing group table to /Applications/freesurfer/subjects/subject_prova/stats/rh.ilf_AS.avg33_mni_flt.AD.txt Writing group table to /Applications/freesurfer/subjects/subject_prova/stats/rh.ilf_AS.avg33_mni_flt.RD.txt Writing group table to /Applications/freesurfer/subjects/subject_prova/stats/rh.ilf_AS.avg33_mni_flt.MD.txt Writing group table to /Applications/freesurfer/subjects/subject_prova/stats/rh.ilf_AS.avg33_mni_flt.FA.txt Writing group table to /Applications/freesurfer/subjects/subject_prova/stats/rh.ilf_AS.avg33_mni_flt.AD_Avg.txt Writing group table to /Applications/freesurfer/subjects/subject_prova/stats/rh.ilf_AS.avg33_mni_flt.RD_Avg.txt Writing group table to /Applications/freesurfer/subjects/subject_prova/stats/rh.ilf_AS.avg33_mni_flt.MD_Avg.txt Writing group table to /Applications/freesurfer/subjects/subject_prova/stats/rh.ilf_AS.avg33_mni_flt.FA_Avg.txt Done in 0.269 sec. dmri_group done /Applications/freesurfer/bin/dmri_group --list /Applications/freesurfer/subjects/subject_prova/stats/lh.unc_AS.avg33_mni_flt.inputs.txt --ref /usr/local/fsl/data/standard/MNI152_T1_1mm_brain.nii.gz --out /Applications/freesurfer/subjects/subject_prova/stats/lh.unc_AS.avg33_mni_flt
cwd /Applications/freesurfer/subjects/subject_prova cmdline /Applications/freesurfer/bin/dmri_group --list /Applications/freesurfer/subjects/subject_prova/stats/lh.unc_AS.avg33_mni_flt.inputs.txt --ref /usr/local/fsl/data/standard/MNI152_T1_1mm_brain.nii.gz --out /Applications/freesurfer/subjects/subject_prova/stats/lh.unc_AS.avg33_mni_flt sysname Darwin hostname iMac-di-Stefano.local machine x86_64 user Stefano Base name of output files: /Applications/freesurfer/subjects/subject_prova/stats/lh.unc_AS.avg33_mni_flt Text file with list of individual inputs: /Applications/freesurfer/subjects/subject_prova/stats/lh.unc_AS.avg33_mni_flt.inputs.txt Loading output reference volume from /usr/local/fsl/data/standard/MNI152_T1_1mm_brain.nii.gz Loading list of inputs from /Applications/freesurfer/subjects/subject_prova/stats/lh.unc_AS.avg33_mni_flt.inputs.txt Loading measures along the path from/Applications/freesurfer/subjects/subject_prova/Control01/dpath/lh.unc_AS_avg33_mni_flt/pathstats .byvoxel.txt Loading input reference volume from /Applications/freesurfer/subjects/subject_prova/Control01/dmri/dtifit_FA.nii.gz Loading affine registration from /Applications/freesurfer/subjects/subject_prova/Control01/dmri/xfms/diff2mni.flt.mat INFO: Sampling interval along path is 2.58957 voxels Writing mean path to /Applications/freesurfer/subjects/subject_prova/stats/lh.unc_AS.avg33_mni_flt.mean.txt Writing group table to /Applications/freesurfer/subjects/subject_prova/stats/lh.unc_AS.avg33_mni_flt.AD.txt Writing group table to /Applications/freesurfer/subjects/subject_prova/stats/lh.unc_AS.avg33_mni_flt.RD.txt Writing group table to /Applications/freesurfer/subjects/subject_prova/stats/lh.unc_AS.avg33_mni_flt.MD.txt Writing group table to /Applications/freesurfer/subjects/subject_prova/stats/lh.unc_AS.avg33_mni_flt.FA.txt Writing group table to /Applications/freesurfer/subjects/subject_prova/stats/lh.unc_AS.avg33_mni_flt.AD_Avg.txt Writing group table to /Applications/freesurfer/subjects/subject_prova/stats/lh.unc_AS.avg33_mni_flt.RD_Avg.txt Writing group table to /Applications/freesurfer/subjects/subject_prova/stats/lh.unc_AS.avg33_mni_flt.MD_Avg.txt Writing group table to /Applications/freesurfer/subjects/subject_prova/stats/lh.unc_AS.avg33_mni_flt.FA_Avg.txt Done in 1.128 sec. dmri_group done /Applications/freesurfer/bin/dmri_group --list /Applications/freesurfer/subjects/subject_prova/stats/rh.unc_AS.avg33_mni_flt.inputs.txt --ref /usr/local/fsl/data/standard/MNI152_T1_1mm_brain.nii.gz --out /Applications/freesurfer/subjects/subject_prova/stats/rh.unc_AS.avg33_mni_flt
cwd /Applications/freesurfer/subjects/subject_prova cmdline /Applications/freesurfer/bin/dmri_group --list /Applications/freesurfer/subjects/subject_prova/stats/rh.unc_AS.avg33_mni_flt.inputs.txt --ref /usr/local/fsl/data/standard/MNI152_T1_1mm_brain.nii.gz --out /Applications/freesurfer/subjects/subject_prova/stats/rh.unc_AS.avg33_mni_flt sysname Darwin hostname iMac-di-Stefano.local machine x86_64 user Stefano Base name of output files: /Applications/freesurfer/subjects/subject_prova/stats/rh.unc_AS.avg33_mni_flt Text file with list of individual inputs: /Applications/freesurfer/subjects/subject_prova/stats/rh.unc_AS.avg33_mni_flt.inputs.txt Loading output reference volume from /usr/local/fsl/data/standard/MNI152_T1_1mm_brain.nii.gz Loading list of inputs from /Applications/freesurfer/subjects/subject_prova/stats/rh.unc_AS.avg33_mni_flt.inputs.txt Loading measures along the path from/Applications/freesurfer/subjects/subject_prova/Control01/dpath/rh.unc_AS_avg33_mni_flt/pathstats .byvoxel.txt Loading input reference volume from /Applications/freesurfer/subjects/subject_prova/Control01/dmri/dtifit_FA.nii.gz Loading affine registration from /Applications/freesurfer/subjects/subject_prova/Control01/dmri/xfms/diff2mni.flt.mat INFO: Sampling interval along path is 2.21483 voxels Writing mean path to /Applications/freesurfer/subjects/subject_prova/stats/rh.unc_AS.avg33_mni_flt.mean.txt Writing group table to /Applications/freesurfer/subjects/subject_prova/stats/rh.unc_AS.avg33_mni_flt.AD.txt Writing group table to /Applications/freesurfer/subjects/subject_prova/stats/rh.unc_AS.avg33_mni_flt.RD.txt Writing group table to /Applications/freesurfer/subjects/subject_prova/stats/rh.unc_AS.avg33_mni_flt.MD.txt Writing group table to /Applications/freesurfer/subjects/subject_prova/stats/rh.unc_AS.avg33_mni_flt.FA.txt Writing group table to /Applications/freesurfer/subjects/subject_prova/stats/rh.unc_AS.avg33_mni_flt.AD_Avg.txt Writing group table to /Applications/freesurfer/subjects/subject_prova/stats/rh.unc_AS.avg33_mni_flt.RD_Avg.txt Writing group table to /Applications/freesurfer/subjects/subject_prova/stats/rh.unc_AS.avg33_mni_flt.MD_Avg.txt Writing group table to /Applications/freesurfer/subjects/subject_prova/stats/rh.unc_AS.avg33_mni_flt.FA_Avg.txt Done in 0.36 sec. dmri_group done /Applications/freesurfer/bin/dmri_group --list /Applications/freesurfer/subjects/subject_prova/stats/fmajor_PP.avg33_mni_flt.inputs.txt --ref /usr/local/fsl/data/standard/MNI152_T1_1mm_brain.nii.gz --out /Applications/freesurfer/subjects/subject_prova/stats/fmajor_PP.avg33_mni_flt
cwd /Applications/freesurfer/subjects/subject_prova cmdline /Applications/freesurfer/bin/dmri_group --list /Applications/freesurfer/subjects/subject_prova/stats/fmajor_PP.avg33_mni_flt.inputs.txt --ref /usr/local/fsl/data/standard/MNI152_T1_1mm_brain.nii.gz --out /Applications/freesurfer/subjects/subject_prova/stats/fmajor_PP.avg33_mni_flt sysname Darwin hostname iMac-di-Stefano.local machine x86_64 user Stefano Base name of output files: /Applications/freesurfer/subjects/subject_prova/stats/fmajor_PP.avg33_mni_flt Text file with list of individual inputs: /Applications/freesurfer/subjects/subject_prova/stats/fmajor_PP.avg33_mni_flt.inputs.txt Loading output reference volume from /usr/local/fsl/data/standard/MNI152_T1_1mm_brain.nii.gz Loading list of inputs from /Applications/freesurfer/subjects/subject_prova/stats/fmajor_PP.avg33_mni_flt.inputs.txt Loading measures along the path from/Applications/freesurfer/subjects/subject_prova/Control01/dpath/fmajor_PP_avg33_mni_flt/pathstats .byvoxel.txt Loading input reference volume from /Applications/freesurfer/subjects/subject_prova/Control01/dmri/dtifit_FA.nii.gz Loading affine registration from /Applications/freesurfer/subjects/subject_prova/Control01/dmri/xfms/diff2mni.flt.mat INFO: Sampling interval along path is 2.32681 voxels Writing mean path to /Applications/freesurfer/subjects/subject_prova/stats/fmajor_PP.avg33_mni_flt.mean.txt Writing group table to /Applications/freesurfer/subjects/subject_prova/stats/fmajor_PP.avg33_mni_flt.AD.txt Writing group table to /Applications/freesurfer/subjects/subject_prova/stats/fmajor_PP.avg33_mni_flt.RD.txt Writing group table to /Applications/freesurfer/subjects/subject_prova/stats/fmajor_PP.avg33_mni_flt.MD.txt Writing group table to /Applications/freesurfer/subjects/subject_prova/stats/fmajor_PP.avg33_mni_flt.FA.txt Writing group table to /Applications/freesurfer/subjects/subject_prova/stats/fmajor_PP.avg33_mni_flt.AD_Avg.txt Writing group table to /Applications/freesurfer/subjects/subject_prova/stats/fmajor_PP.avg33_mni_flt.RD_Avg.txt Writing group table to /Applications/freesurfer/subjects/subject_prova/stats/fmajor_PP.avg33_mni_flt.MD_Avg.txt Writing group table to /Applications/freesurfer/subjects/subject_prova/stats/fmajor_PP.avg33_mni_flt.FA_Avg.txt Done in 0.32 sec. dmri_group done /Applications/freesurfer/bin/dmri_group --list /Applications/freesurfer/subjects/subject_prova/stats/fminor_PP.avg33_mni_flt.inputs.txt --ref /usr/local/fsl/data/standard/MNI152_T1_1mm_brain.nii.gz --out /Applications/freesurfer/subjects/subject_prova/stats/fminor_PP.avg33_mni_flt
cwd /Applications/freesurfer/subjects/subject_prova cmdline /Applications/freesurfer/bin/dmri_group --list /Applications/freesurfer/subjects/subject_prova/stats/fminor_PP.avg33_mni_flt.inputs.txt --ref /usr/local/fsl/data/standard/MNI152_T1_1mm_brain.nii.gz --out /Applications/freesurfer/subjects/subject_prova/stats/fminor_PP.avg33_mni_flt sysname Darwin hostname iMac-di-Stefano.local machine x86_64 user Stefano Base name of output files: /Applications/freesurfer/subjects/subject_prova/stats/fminor_PP.avg33_mni_flt Text file with list of individual inputs: /Applications/freesurfer/subjects/subject_prova/stats/fminor_PP.avg33_mni_flt.inputs.txt Loading output reference volume from /usr/local/fsl/data/standard/MNI152_T1_1mm_brain.nii.gz Loading list of inputs from /Applications/freesurfer/subjects/subject_prova/stats/fminor_PP.avg33_mni_flt.inputs.txt Loading measures along the path from/Applications/freesurfer/subjects/subject_prova/Control01/dpath/fminor_PP_avg33_mni_flt/pathstats .byvoxel.txt Loading input reference volume from /Applications/freesurfer/subjects/subject_prova/Control01/dmri/dtifit_FA.nii.gz Loading affine registration from /Applications/freesurfer/subjects/subject_prova/Control01/dmri/xfms/diff2mni.flt.mat INFO: Sampling interval along path is 2.13356 voxels Writing mean path to /Applications/freesurfer/subjects/subject_prova/stats/fminor_PP.avg33_mni_flt.mean.txt Writing group table to /Applications/freesurfer/subjects/subject_prova/stats/fminor_PP.avg33_mni_flt.AD.txt Writing group table to /Applications/freesurfer/subjects/subject_prova/stats/fminor_PP.avg33_mni_flt.RD.txt Writing group table to /Applications/freesurfer/subjects/subject_prova/stats/fminor_PP.avg33_mni_flt.MD.txt Writing group table to /Applications/freesurfer/subjects/subject_prova/stats/fminor_PP.avg33_mni_flt.FA.txt Writing group table to /Applications/freesurfer/subjects/subject_prova/stats/fminor_PP.avg33_mni_flt.AD_Avg.txt Writing group table to /Applications/freesurfer/subjects/subject_prova/stats/fminor_PP.avg33_mni_flt.RD_Avg.txt Writing group table to /Applications/freesurfer/subjects/subject_prova/stats/fminor_PP.avg33_mni_flt.MD_Avg.txt Writing group table to /Applications/freesurfer/subjects/subject_prova/stats/fminor_PP.avg33_mni_flt.FA_Avg.txt Done in 0.273 sec. dmri_group done /Applications/freesurfer/bin/dmri_group --list /Applications/freesurfer/subjects/subject_prova/stats/lh.atr_PP.avg33_mni_flt.inputs.txt --ref /usr/local/fsl/data/standard/MNI152_T1_1mm_brain.nii.gz --out /Applications/freesurfer/subjects/subject_prova/stats/lh.atr_PP.avg33_mni_flt
cwd /Applications/freesurfer/subjects/subject_prova cmdline /Applications/freesurfer/bin/dmri_group --list /Applications/freesurfer/subjects/subject_prova/stats/lh.atr_PP.avg33_mni_flt.inputs.txt --ref /usr/local/fsl/data/standard/MNI152_T1_1mm_brain.nii.gz --out /Applications/freesurfer/subjects/subject_prova/stats/lh.atr_PP.avg33_mni_flt sysname Darwin hostname iMac-di-Stefano.local machine x86_64 user Stefano Base name of output files: /Applications/freesurfer/subjects/subject_prova/stats/lh.atr_PP.avg33_mni_flt Text file with list of individual inputs: /Applications/freesurfer/subjects/subject_prova/stats/lh.atr_PP.avg33_mni_flt.inputs.txt Loading output reference volume from /usr/local/fsl/data/standard/MNI152_T1_1mm_brain.nii.gz Loading list of inputs from /Applications/freesurfer/subjects/subject_prova/stats/lh.atr_PP.avg33_mni_flt.inputs.txt Loading measures along the path from/Applications/freesurfer/subjects/subject_prova/Control01/dpath/lh.atr_PP_avg33_mni_flt/pathstats .byvoxel.txt Loading input reference volume from /Applications/freesurfer/subjects/subject_prova/Control01/dmri/dtifit_FA.nii.gz Loading affine registration from /Applications/freesurfer/subjects/subject_prova/Control01/dmri/xfms/diff2mni.flt.mat INFO: Sampling interval along path is 2.25399 voxels Writing mean path to /Applications/freesurfer/subjects/subject_prova/stats/lh.atr_PP.avg33_mni_flt.mean.txt Writing group table to /Applications/freesurfer/subjects/subject_prova/stats/lh.atr_PP.avg33_mni_flt.AD.txt Writing group table to /Applications/freesurfer/subjects/subject_prova/stats/lh.atr_PP.avg33_mni_flt.RD.txt Writing group table to /Applications/freesurfer/subjects/subject_prova/stats/lh.atr_PP.avg33_mni_flt.MD.txt Writing group table to /Applications/freesurfer/subjects/subject_prova/stats/lh.atr_PP.avg33_mni_flt.FA.txt Writing group table to /Applications/freesurfer/subjects/subject_prova/stats/lh.atr_PP.avg33_mni_flt.AD_Avg.txt Writing group table to /Applications/freesurfer/subjects/subject_prova/stats/lh.atr_PP.avg33_mni_flt.RD_Avg.txt Writing group table to /Applications/freesurfer/subjects/subject_prova/stats/lh.atr_PP.avg33_mni_flt.MD_Avg.txt Writing group table to /Applications/freesurfer/subjects/subject_prova/stats/lh.atr_PP.avg33_mni_flt.FA_Avg.txt Done in 0.3 sec. dmri_group done /Applications/freesurfer/bin/dmri_group --list /Applications/freesurfer/subjects/subject_prova/stats/rh.atr_PP.avg33_mni_flt.inputs.txt --ref /usr/local/fsl/data/standard/MNI152_T1_1mm_brain.nii.gz --out /Applications/freesurfer/subjects/subject_prova/stats/rh.atr_PP.avg33_mni_flt
cwd /Applications/freesurfer/subjects/subject_prova cmdline /Applications/freesurfer/bin/dmri_group --list /Applications/freesurfer/subjects/subject_prova/stats/rh.atr_PP.avg33_mni_flt.inputs.txt --ref /usr/local/fsl/data/standard/MNI152_T1_1mm_brain.nii.gz --out /Applications/freesurfer/subjects/subject_prova/stats/rh.atr_PP.avg33_mni_flt sysname Darwin hostname iMac-di-Stefano.local machine x86_64 user Stefano Base name of output files: /Applications/freesurfer/subjects/subject_prova/stats/rh.atr_PP.avg33_mni_flt Text file with list of individual inputs: /Applications/freesurfer/subjects/subject_prova/stats/rh.atr_PP.avg33_mni_flt.inputs.txt Loading output reference volume from /usr/local/fsl/data/standard/MNI152_T1_1mm_brain.nii.gz Loading list of inputs from /Applications/freesurfer/subjects/subject_prova/stats/rh.atr_PP.avg33_mni_flt.inputs.txt Loading measures along the path from/Applications/freesurfer/subjects/subject_prova/Control01/dpath/rh.atr_PP_avg33_mni_flt/pathstats .byvoxel.txt Loading input reference volume from /Applications/freesurfer/subjects/subject_prova/Control01/dmri/dtifit_FA.nii.gz Loading affine registration from /Applications/freesurfer/subjects/subject_prova/Control01/dmri/xfms/diff2mni.flt.mat INFO: Sampling interval along path is 2.18351 voxels Writing mean path to /Applications/freesurfer/subjects/subject_prova/stats/rh.atr_PP.avg33_mni_flt.mean.txt Writing group table to /Applications/freesurfer/subjects/subject_prova/stats/rh.atr_PP.avg33_mni_flt.AD.txt Writing group table to /Applications/freesurfer/subjects/subject_prova/stats/rh.atr_PP.avg33_mni_flt.RD.txt Writing group table to /Applications/freesurfer/subjects/subject_prova/stats/rh.atr_PP.avg33_mni_flt.MD.txt Writing group table to /Applications/freesurfer/subjects/subject_prova/stats/rh.atr_PP.avg33_mni_flt.FA.txt Writing group table to /Applications/freesurfer/subjects/subject_prova/stats/rh.atr_PP.avg33_mni_flt.AD_Avg.txt Writing group table to /Applications/freesurfer/subjects/subject_prova/stats/rh.atr_PP.avg33_mni_flt.RD_Avg.txt Writing group table to /Applications/freesurfer/subjects/subject_prova/stats/rh.atr_PP.avg33_mni_flt.MD_Avg.txt Writing group table to /Applications/freesurfer/subjects/subject_prova/stats/rh.atr_PP.avg33_mni_flt.FA_Avg.txt Done in 0.298 sec. dmri_group done /Applications/freesurfer/bin/dmri_group --list /Applications/freesurfer/subjects/subject_prova/stats/lh.cab_PP.avg33_mni_flt.inputs.txt --ref /usr/local/fsl/data/standard/MNI152_T1_1mm_brain.nii.gz --out /Applications/freesurfer/subjects/subject_prova/stats/lh.cab_PP.avg33_mni_flt
cwd /Applications/freesurfer/subjects/subject_prova cmdline /Applications/freesurfer/bin/dmri_group --list /Applications/freesurfer/subjects/subject_prova/stats/lh.cab_PP.avg33_mni_flt.inputs.txt --ref /usr/local/fsl/data/standard/MNI152_T1_1mm_brain.nii.gz --out /Applications/freesurfer/subjects/subject_prova/stats/lh.cab_PP.avg33_mni_flt sysname Darwin hostname iMac-di-Stefano.local machine x86_64 user Stefano Base name of output files: /Applications/freesurfer/subjects/subject_prova/stats/lh.cab_PP.avg33_mni_flt Text file with list of individual inputs: /Applications/freesurfer/subjects/subject_prova/stats/lh.cab_PP.avg33_mni_flt.inputs.txt Loading output reference volume from /usr/local/fsl/data/standard/MNI152_T1_1mm_brain.nii.gz Loading list of inputs from /Applications/freesurfer/subjects/subject_prova/stats/lh.cab_PP.avg33_mni_flt.inputs.txt Loading measures along the path from/Applications/freesurfer/subjects/subject_prova/Control01/dpath/lh.cab_PP_avg33_mni_flt/pathstats .byvoxel.txt Loading input reference volume from /Applications/freesurfer/subjects/subject_prova/Control01/dmri/dtifit_FA.nii.gz Loading affine registration from /Applications/freesurfer/subjects/subject_prova/Control01/dmri/xfms/diff2mni.flt.mat INFO: Sampling interval along path is 2.62361 voxels Writing mean path to /Applications/freesurfer/subjects/subject_prova/stats/lh.cab_PP.avg33_mni_flt.mean.txt Writing group table to /Applications/freesurfer/subjects/subject_prova/stats/lh.cab_PP.avg33_mni_flt.AD.txt Writing group table to /Applications/freesurfer/subjects/subject_prova/stats/lh.cab_PP.avg33_mni_flt.RD.txt Writing group table to /Applications/freesurfer/subjects/subject_prova/stats/lh.cab_PP.avg33_mni_flt.MD.txt Writing group table to /Applications/freesurfer/subjects/subject_prova/stats/lh.cab_PP.avg33_mni_flt.FA.txt Writing group table to /Applications/freesurfer/subjects/subject_prova/stats/lh.cab_PP.avg33_mni_flt.AD_Avg.txt Writing group table to /Applications/freesurfer/subjects/subject_prova/stats/lh.cab_PP.avg33_mni_flt.RD_Avg.txt Writing group table to /Applications/freesurfer/subjects/subject_prova/stats/lh.cab_PP.avg33_mni_flt.MD_Avg.txt Writing group table to /Applications/freesurfer/subjects/subject_prova/stats/lh.cab_PP.avg33_mni_flt.FA_Avg.txt Done in 0.293 sec. dmri_group done /Applications/freesurfer/bin/dmri_group --list /Applications/freesurfer/subjects/subject_prova/stats/rh.cab_PP.avg33_mni_flt.inputs.txt --ref /usr/local/fsl/data/standard/MNI152_T1_1mm_brain.nii.gz --out /Applications/freesurfer/subjects/subject_prova/stats/rh.cab_PP.avg33_mni_flt
cwd /Applications/freesurfer/subjects/subject_prova cmdline /Applications/freesurfer/bin/dmri_group --list /Applications/freesurfer/subjects/subject_prova/stats/rh.cab_PP.avg33_mni_flt.inputs.txt --ref /usr/local/fsl/data/standard/MNI152_T1_1mm_brain.nii.gz --out /Applications/freesurfer/subjects/subject_prova/stats/rh.cab_PP.avg33_mni_flt sysname Darwin hostname iMac-di-Stefano.local machine x86_64 user Stefano Base name of output files: /Applications/freesurfer/subjects/subject_prova/stats/rh.cab_PP.avg33_mni_flt Text file with list of individual inputs: /Applications/freesurfer/subjects/subject_prova/stats/rh.cab_PP.avg33_mni_flt.inputs.txt Loading output reference volume from /usr/local/fsl/data/standard/MNI152_T1_1mm_brain.nii.gz Loading list of inputs from /Applications/freesurfer/subjects/subject_prova/stats/rh.cab_PP.avg33_mni_flt.inputs.txt Loading measures along the path from/Applications/freesurfer/subjects/subject_prova/Control01/dpath/rh.cab_PP_avg33_mni_flt/pathstats .byvoxel.txt Loading input reference volume from /Applications/freesurfer/subjects/subject_prova/Control01/dmri/dtifit_FA.nii.gz Loading affine registration from /Applications/freesurfer/subjects/subject_prova/Control01/dmri/xfms/diff2mni.flt.mat INFO: Sampling interval along path is 2.32551 voxels Writing mean path to /Applications/freesurfer/subjects/subject_prova/stats/rh.cab_PP.avg33_mni_flt.mean.txt Writing group table to /Applications/freesurfer/subjects/subject_prova/stats/rh.cab_PP.avg33_mni_flt.AD.txt Writing group table to /Applications/freesurfer/subjects/subject_prova/stats/rh.cab_PP.avg33_mni_flt.RD.txt Writing group table to /Applications/freesurfer/subjects/subject_prova/stats/rh.cab_PP.avg33_mni_flt.MD.txt Writing group table to /Applications/freesurfer/subjects/subject_prova/stats/rh.cab_PP.avg33_mni_flt.FA.txt Writing group table to /Applications/freesurfer/subjects/subject_prova/stats/rh.cab_PP.avg33_mni_flt.AD_Avg.txt Writing group table to /Applications/freesurfer/subjects/subject_prova/stats/rh.cab_PP.avg33_mni_flt.RD_Avg.txt Writing group table to /Applications/freesurfer/subjects/subject_prova/stats/rh.cab_PP.avg33_mni_flt.MD_Avg.txt Writing group table to /Applications/freesurfer/subjects/subject_prova/stats/rh.cab_PP.avg33_mni_flt.FA_Avg.txt Done in 0.27 sec. dmri_group done /Applications/freesurfer/bin/dmri_group --list /Applications/freesurfer/subjects/subject_prova/stats/lh.ccg_PP.avg33_mni_flt.inputs.txt --ref /usr/local/fsl/data/standard/MNI152_T1_1mm_brain.nii.gz --out /Applications/freesurfer/subjects/subject_prova/stats/lh.ccg_PP.avg33_mni_flt
cwd /Applications/freesurfer/subjects/subject_prova cmdline /Applications/freesurfer/bin/dmri_group --list /Applications/freesurfer/subjects/subject_prova/stats/lh.ccg_PP.avg33_mni_flt.inputs.txt --ref /usr/local/fsl/data/standard/MNI152_T1_1mm_brain.nii.gz --out /Applications/freesurfer/subjects/subject_prova/stats/lh.ccg_PP.avg33_mni_flt sysname Darwin hostname iMac-di-Stefano.local machine x86_64 user Stefano Base name of output files: /Applications/freesurfer/subjects/subject_prova/stats/lh.ccg_PP.avg33_mni_flt Text file with list of individual inputs: /Applications/freesurfer/subjects/subject_prova/stats/lh.ccg_PP.avg33_mni_flt.inputs.txt Loading output reference volume from /usr/local/fsl/data/standard/MNI152_T1_1mm_brain.nii.gz Loading list of inputs from /Applications/freesurfer/subjects/subject_prova/stats/lh.ccg_PP.avg33_mni_flt.inputs.txt Loading measures along the path from/Applications/freesurfer/subjects/subject_prova/Control01/dpath/lh.ccg_PP_avg33_mni_flt/pathstats .byvoxel.txt Loading input reference volume from /Applications/freesurfer/subjects/subject_prova/Control01/dmri/dtifit_FA.nii.gz Loading affine registration from /Applications/freesurfer/subjects/subject_prova/Control01/dmri/xfms/diff2mni.flt.mat INFO: Sampling interval along path is 2.30666 voxels Writing mean path to /Applications/freesurfer/subjects/subject_prova/stats/lh.ccg_PP.avg33_mni_flt.mean.txt Writing group table to /Applications/freesurfer/subjects/subject_prova/stats/lh.ccg_PP.avg33_mni_flt.AD.txt Writing group table to /Applications/freesurfer/subjects/subject_prova/stats/lh.ccg_PP.avg33_mni_flt.RD.txt Writing group table to /Applications/freesurfer/subjects/subject_prova/stats/lh.ccg_PP.avg33_mni_flt.MD.txt Writing group table to /Applications/freesurfer/subjects/subject_prova/stats/lh.ccg_PP.avg33_mni_flt.FA.txt Writing group table to /Applications/freesurfer/subjects/subject_prova/stats/lh.ccg_PP.avg33_mni_flt.AD_Avg.txt Writing group table to /Applications/freesurfer/subjects/subject_prova/stats/lh.ccg_PP.avg33_mni_flt.RD_Avg.txt Writing group table to /Applications/freesurfer/subjects/subject_prova/stats/lh.ccg_PP.avg33_mni_flt.MD_Avg.txt Writing group table to /Applications/freesurfer/subjects/subject_prova/stats/lh.ccg_PP.avg33_mni_flt.FA_Avg.txt Done in 0.273 sec. dmri_group done /Applications/freesurfer/bin/dmri_group --list /Applications/freesurfer/subjects/subject_prova/stats/rh.ccg_PP.avg33_mni_flt.inputs.txt --ref /usr/local/fsl/data/standard/MNI152_T1_1mm_brain.nii.gz --out /Applications/freesurfer/subjects/subject_prova/stats/rh.ccg_PP.avg33_mni_flt
cwd /Applications/freesurfer/subjects/subject_prova cmdline /Applications/freesurfer/bin/dmri_group --list /Applications/freesurfer/subjects/subject_prova/stats/rh.ccg_PP.avg33_mni_flt.inputs.txt --ref /usr/local/fsl/data/standard/MNI152_T1_1mm_brain.nii.gz --out /Applications/freesurfer/subjects/subject_prova/stats/rh.ccg_PP.avg33_mni_flt sysname Darwin hostname iMac-di-Stefano.local machine x86_64 user Stefano Base name of output files: /Applications/freesurfer/subjects/subject_prova/stats/rh.ccg_PP.avg33_mni_flt Text file with list of individual inputs: /Applications/freesurfer/subjects/subject_prova/stats/rh.ccg_PP.avg33_mni_flt.inputs.txt Loading output reference volume from /usr/local/fsl/data/standard/MNI152_T1_1mm_brain.nii.gz Loading list of inputs from /Applications/freesurfer/subjects/subject_prova/stats/rh.ccg_PP.avg33_mni_flt.inputs.txt Loading measures along the path from/Applications/freesurfer/subjects/subject_prova/Control01/dpath/rh.ccg_PP_avg33_mni_flt/pathstats .byvoxel.txt Loading input reference volume from /Applications/freesurfer/subjects/subject_prova/Control01/dmri/dtifit_FA.nii.gz Loading affine registration from /Applications/freesurfer/subjects/subject_prova/Control01/dmri/xfms/diff2mni.flt.mat INFO: Sampling interval along path is 2.31858 voxels Writing mean path to /Applications/freesurfer/subjects/subject_prova/stats/rh.ccg_PP.avg33_mni_flt.mean.txt Writing group table to /Applications/freesurfer/subjects/subject_prova/stats/rh.ccg_PP.avg33_mni_flt.AD.txt Writing group table to /Applications/freesurfer/subjects/subject_prova/stats/rh.ccg_PP.avg33_mni_flt.RD.txt Writing group table to /Applications/freesurfer/subjects/subject_prova/stats/rh.ccg_PP.avg33_mni_flt.MD.txt Writing group table to /Applications/freesurfer/subjects/subject_prova/stats/rh.ccg_PP.avg33_mni_flt.FA.txt Writing group table to /Applications/freesurfer/subjects/subject_prova/stats/rh.ccg_PP.avg33_mni_flt.AD_Avg.txt Writing group table to /Applications/freesurfer/subjects/subject_prova/stats/rh.ccg_PP.avg33_mni_flt.RD_Avg.txt Writing group table to /Applications/freesurfer/subjects/subject_prova/stats/rh.ccg_PP.avg33_mni_flt.MD_Avg.txt Writing group table to /Applications/freesurfer/subjects/subject_prova/stats/rh.ccg_PP.avg33_mni_flt.FA_Avg.txt Done in 0.28 sec. dmri_group done /Applications/freesurfer/bin/dmri_group --list /Applications/freesurfer/subjects/subject_prova/stats/lh.slfp_PP.avg33_mni_flt.inputs.txt --ref /usr/local/fsl/data/standard/MNI152_T1_1mm_brain.nii.gz --out /Applications/freesurfer/subjects/subject_prova/stats/lh.slfp_PP.avg33_mni_flt
cwd /Applications/freesurfer/subjects/subject_prova cmdline /Applications/freesurfer/bin/dmri_group --list /Applications/freesurfer/subjects/subject_prova/stats/lh.slfp_PP.avg33_mni_flt.inputs.txt --ref /usr/local/fsl/data/standard/MNI152_T1_1mm_brain.nii.gz --out /Applications/freesurfer/subjects/subject_prova/stats/lh.slfp_PP.avg33_mni_flt sysname Darwin hostname iMac-di-Stefano.local machine x86_64 user Stefano Base name of output files: /Applications/freesurfer/subjects/subject_prova/stats/lh.slfp_PP.avg33_mni_flt Text file with list of individual inputs: /Applications/freesurfer/subjects/subject_prova/stats/lh.slfp_PP.avg33_mni_flt.inputs.txt Loading output reference volume from /usr/local/fsl/data/standard/MNI152_T1_1mm_brain.nii.gz Loading list of inputs from /Applications/freesurfer/subjects/subject_prova/stats/lh.slfp_PP.avg33_mni_flt.inputs.txt Loading measures along the path from/Applications/freesurfer/subjects/subject_prova/Control01/dpath/lh.slfp_PP_avg33_mni_flt/pathstat s.byvoxel.txt Loading input reference volume from /Applications/freesurfer/subjects/subject_prova/Control01/dmri/dtifit_FA.nii.gz Loading affine registration from /Applications/freesurfer/subjects/subject_prova/Control01/dmri/xfms/diff2mni.flt.mat INFO: Sampling interval along path is 2.11608 voxels Writing mean path to /Applications/freesurfer/subjects/subject_prova/stats/lh.slfp_PP.avg33_mni_flt.mean.txt Writing group table to /Applications/freesurfer/subjects/subject_prova/stats/lh.slfp_PP.avg33_mni_flt.AD.txt Writing group table to /Applications/freesurfer/subjects/subject_prova/stats/lh.slfp_PP.avg33_mni_flt.RD.txt Writing group table to /Applications/freesurfer/subjects/subject_prova/stats/lh.slfp_PP.avg33_mni_flt.MD.txt Writing group table to /Applications/freesurfer/subjects/subject_prova/stats/lh.slfp_PP.avg33_mni_flt.FA.txt Writing group table to /Applications/freesurfer/subjects/subject_prova/stats/lh.slfp_PP.avg33_mni_flt.AD_Avg.txt Writing group table to /Applications/freesurfer/subjects/subject_prova/stats/lh.slfp_PP.avg33_mni_flt.RD_Avg.txt Writing group table to /Applications/freesurfer/subjects/subject_prova/stats/lh.slfp_PP.avg33_mni_flt.MD_Avg.txt Writing group table to /Applications/freesurfer/subjects/subject_prova/stats/lh.slfp_PP.avg33_mni_flt.FA_Avg.txt Done in 0.312 sec. dmri_group done /Applications/freesurfer/bin/dmri_group --list /Applications/freesurfer/subjects/subject_prova/stats/rh.slfp_PP.avg33_mni_flt.inputs.txt --ref /usr/local/fsl/data/standard/MNI152_T1_1mm_brain.nii.gz --out /Applications/freesurfer/subjects/subject_prova/stats/rh.slfp_PP.avg33_mni_flt
cwd /Applications/freesurfer/subjects/subject_prova cmdline /Applications/freesurfer/bin/dmri_group --list /Applications/freesurfer/subjects/subject_prova/stats/rh.slfp_PP.avg33_mni_flt.inputs.txt --ref /usr/local/fsl/data/standard/MNI152_T1_1mm_brain.nii.gz --out /Applications/freesurfer/subjects/subject_prova/stats/rh.slfp_PP.avg33_mni_flt sysname Darwin hostname iMac-di-Stefano.local machine x86_64 user Stefano Base name of output files: /Applications/freesurfer/subjects/subject_prova/stats/rh.slfp_PP.avg33_mni_flt Text file with list of individual inputs: /Applications/freesurfer/subjects/subject_prova/stats/rh.slfp_PP.avg33_mni_flt.inputs.txt Loading output reference volume from /usr/local/fsl/data/standard/MNI152_T1_1mm_brain.nii.gz Loading list of inputs from /Applications/freesurfer/subjects/subject_prova/stats/rh.slfp_PP.avg33_mni_flt.inputs.txt Loading measures along the path from/Applications/freesurfer/subjects/subject_prova/Control01/dpath/rh.slfp_PP_avg33_mni_flt/pathstat s.byvoxel.txt Loading input reference volume from /Applications/freesurfer/subjects/subject_prova/Control01/dmri/dtifit_FA.nii.gz Loading affine registration from /Applications/freesurfer/subjects/subject_prova/Control01/dmri/xfms/diff2mni.flt.mat INFO: Sampling interval along path is 2.3463 voxels Writing mean path to /Applications/freesurfer/subjects/subject_prova/stats/rh.slfp_PP.avg33_mni_flt.mean.txt Writing group table to /Applications/freesurfer/subjects/subject_prova/stats/rh.slfp_PP.avg33_mni_flt.AD.txt Writing group table to /Applications/freesurfer/subjects/subject_prova/stats/rh.slfp_PP.avg33_mni_flt.RD.txt Writing group table to /Applications/freesurfer/subjects/subject_prova/stats/rh.slfp_PP.avg33_mni_flt.MD.txt Writing group table to /Applications/freesurfer/subjects/subject_prova/stats/rh.slfp_PP.avg33_mni_flt.FA.txt Writing group table to /Applications/freesurfer/subjects/subject_prova/stats/rh.slfp_PP.avg33_mni_flt.AD_Avg.txt Writing group table to /Applications/freesurfer/subjects/subject_prova/stats/rh.slfp_PP.avg33_mni_flt.RD_Avg.txt Writing group table to /Applications/freesurfer/subjects/subject_prova/stats/rh.slfp_PP.avg33_mni_flt.MD_Avg.txt Writing group table to /Applications/freesurfer/subjects/subject_prova/stats/rh.slfp_PP.avg33_mni_flt.FA_Avg.txt Done in 0.274 sec. dmri_group done /Applications/freesurfer/bin/dmri_group --list /Applications/freesurfer/subjects/subject_prova/stats/lh.slft_PP.avg33_mni_flt.inputs.txt --ref /usr/local/fsl/data/standard/MNI152_T1_1mm_brain.nii.gz --out /Applications/freesurfer/subjects/subject_prova/stats/lh.slft_PP.avg33_mni_flt
cwd /Applications/freesurfer/subjects/subject_prova cmdline /Applications/freesurfer/bin/dmri_group --list /Applications/freesurfer/subjects/subject_prova/stats/lh.slft_PP.avg33_mni_flt.inputs.txt --ref /usr/local/fsl/data/standard/MNI152_T1_1mm_brain.nii.gz --out /Applications/freesurfer/subjects/subject_prova/stats/lh.slft_PP.avg33_mni_flt sysname Darwin hostname iMac-di-Stefano.local machine x86_64 user Stefano Base name of output files: /Applications/freesurfer/subjects/subject_prova/stats/lh.slft_PP.avg33_mni_flt Text file with list of individual inputs: /Applications/freesurfer/subjects/subject_prova/stats/lh.slft_PP.avg33_mni_flt.inputs.txt Loading output reference volume from /usr/local/fsl/data/standard/MNI152_T1_1mm_brain.nii.gz Loading list of inputs from /Applications/freesurfer/subjects/subject_prova/stats/lh.slft_PP.avg33_mni_flt.inputs.txt Loading measures along the path from/Applications/freesurfer/subjects/subject_prova/Control01/dpath/lh.slft_PP_avg33_mni_flt/pathstat s.byvoxel.txt Loading input reference volume from /Applications/freesurfer/subjects/subject_prova/Control01/dmri/dtifit_FA.nii.gz Loading affine registration from /Applications/freesurfer/subjects/subject_prova/Control01/dmri/xfms/diff2mni.flt.mat INFO: Sampling interval along path is 2.15215 voxels Writing mean path to /Applications/freesurfer/subjects/subject_prova/stats/lh.slft_PP.avg33_mni_flt.mean.txt Writing group table to /Applications/freesurfer/subjects/subject_prova/stats/lh.slft_PP.avg33_mni_flt.AD.txt Writing group table to /Applications/freesurfer/subjects/subject_prova/stats/lh.slft_PP.avg33_mni_flt.RD.txt Writing group table to /Applications/freesurfer/subjects/subject_prova/stats/lh.slft_PP.avg33_mni_flt.MD.txt Writing group table to /Applications/freesurfer/subjects/subject_prova/stats/lh.slft_PP.avg33_mni_flt.FA.txt Writing group table to /Applications/freesurfer/subjects/subject_prova/stats/lh.slft_PP.avg33_mni_flt.AD_Avg.txt Writing group table to /Applications/freesurfer/subjects/subject_prova/stats/lh.slft_PP.avg33_mni_flt.RD_Avg.txt Writing group table to /Applications/freesurfer/subjects/subject_prova/stats/lh.slft_PP.avg33_mni_flt.MD_Avg.txt Writing group table to /Applications/freesurfer/subjects/subject_prova/stats/lh.slft_PP.avg33_mni_flt.FA_Avg.txt Done in 0.306 sec. dmri_group done /Applications/freesurfer/bin/dmri_group --list /Applications/freesurfer/subjects/subject_prova/stats/rh.slft_PP.avg33_mni_flt.inputs.txt --ref /usr/local/fsl/data/standard/MNI152_T1_1mm_brain.nii.gz --out /Applications/freesurfer/subjects/subject_prova/stats/rh.slft_PP.avg33_mni_flt
cwd /Applications/freesurfer/subjects/subject_prova cmdline /Applications/freesurfer/bin/dmri_group --list /Applications/freesurfer/subjects/subject_prova/stats/rh.slft_PP.avg33_mni_flt.inputs.txt --ref /usr/local/fsl/data/standard/MNI152_T1_1mm_brain.nii.gz --out /Applications/freesurfer/subjects/subject_prova/stats/rh.slft_PP.avg33_mni_flt sysname Darwin hostname iMac-di-Stefano.local machine x86_64 user Stefano Base name of output files: /Applications/freesurfer/subjects/subject_prova/stats/rh.slft_PP.avg33_mni_flt Text file with list of individual inputs: /Applications/freesurfer/subjects/subject_prova/stats/rh.slft_PP.avg33_mni_flt.inputs.txt Loading output reference volume from /usr/local/fsl/data/standard/MNI152_T1_1mm_brain.nii.gz Loading list of inputs from /Applications/freesurfer/subjects/subject_prova/stats/rh.slft_PP.avg33_mni_flt.inputs.txt Loading measures along the path from/Applications/freesurfer/subjects/subject_prova/Control01/dpath/rh.slft_PP_avg33_mni_flt/pathstat s.byvoxel.txt Loading input reference volume from /Applications/freesurfer/subjects/subject_prova/Control01/dmri/dtifit_FA.nii.gz Loading affine registration from /Applications/freesurfer/subjects/subject_prova/Control01/dmri/xfms/diff2mni.flt.mat INFO: Sampling interval along path is 2.3093 voxels Writing mean path to /Applications/freesurfer/subjects/subject_prova/stats/rh.slft_PP.avg33_mni_flt.mean.txt Writing group table to /Applications/freesurfer/subjects/subject_prova/stats/rh.slft_PP.avg33_mni_flt.AD.txt Writing group table to /Applications/freesurfer/subjects/subject_prova/stats/rh.slft_PP.avg33_mni_flt.RD.txt Writing group table to /Applications/freesurfer/subjects/subject_prova/stats/rh.slft_PP.avg33_mni_flt.MD.txt Writing group table to /Applications/freesurfer/subjects/subject_prova/stats/rh.slft_PP.avg33_mni_flt.FA.txt Writing group table to /Applications/freesurfer/subjects/subject_prova/stats/rh.slft_PP.avg33_mni_flt.AD_Avg.txt Writing group table to /Applications/freesurfer/subjects/subject_prova/stats/rh.slft_PP.avg33_mni_flt.RD_Avg.txt Writing group table to /Applications/freesurfer/subjects/subject_prova/stats/rh.slft_PP.avg33_mni_flt.MD_Avg.txt Writing group table to /Applications/freesurfer/subjects/subject_prova/stats/rh.slft_PP.avg33_mni_flt.FA_Avg.txt Done in 0.31 sec. dmri_group done /Applications/freesurfer/bin/dmri_group --list /Applications/freesurfer/subjects/subject_prova/stats/lh.cst_AS.avg33_mni_bbr.inputs.txt --ref /usr/local/fsl/data/standard/MNI152_T1_1mm_brain.nii.gz --out /Applications/freesurfer/subjects/subject_prova/stats/lh.cst_AS.avg33_mni_bbr
cwd /Applications/freesurfer/subjects/subject_prova cmdline /Applications/freesurfer/bin/dmri_group --list /Applications/freesurfer/subjects/subject_prova/stats/lh.cst_AS.avg33_mni_bbr.inputs.txt --ref /usr/local/fsl/data/standard/MNI152_T1_1mm_brain.nii.gz --out /Applications/freesurfer/subjects/subject_prova/stats/lh.cst_AS.avg33_mni_bbr sysname Darwin hostname iMac-di-Stefano.local machine x86_64 user Stefano Base name of output files: /Applications/freesurfer/subjects/subject_prova/stats/lh.cst_AS.avg33_mni_bbr Text file with list of individual inputs: /Applications/freesurfer/subjects/subject_prova/stats/lh.cst_AS.avg33_mni_bbr.inputs.txt Loading output reference volume from /usr/local/fsl/data/standard/MNI152_T1_1mm_brain.nii.gz Loading list of inputs from /Applications/freesurfer/subjects/subject_prova/stats/lh.cst_AS.avg33_mni_bbr.inputs.txt Loading measures along the path from/Applications/freesurfer/subjects/subject_prova/Control01/dpath/lh.cst_AS_avg33_mni_bbr/pathstats .byvoxel.txt Loading input reference volume from /Applications/freesurfer/subjects/subject_prova/Control01/dmri/dtifit_FA.nii.gz Loading affine registration from /Applications/freesurfer/subjects/subject_prova/Control01/dmri/xfms/diff2mni.bbr.mat INFO: Sampling interval along path is 2.49298 voxels Writing mean path to /Applications/freesurfer/subjects/subject_prova/stats/lh.cst_AS.avg33_mni_bbr.mean.txt Writing group table to /Applications/freesurfer/subjects/subject_prova/stats/lh.cst_AS.avg33_mni_bbr.AD.txt Writing group table to /Applications/freesurfer/subjects/subject_prova/stats/lh.cst_AS.avg33_mni_bbr.RD.txt Writing group table to /Applications/freesurfer/subjects/subject_prova/stats/lh.cst_AS.avg33_mni_bbr.MD.txt Writing group table to /Applications/freesurfer/subjects/subject_prova/stats/lh.cst_AS.avg33_mni_bbr.FA.txt Writing group table to /Applications/freesurfer/subjects/subject_prova/stats/lh.cst_AS.avg33_mni_bbr.AD_Avg.txt Writing group table to /Applications/freesurfer/subjects/subject_prova/stats/lh.cst_AS.avg33_mni_bbr.RD_Avg.txt Writing group table to /Applications/freesurfer/subjects/subject_prova/stats/lh.cst_AS.avg33_mni_bbr.MD_Avg.txt Writing group table to /Applications/freesurfer/subjects/subject_prova/stats/lh.cst_AS.avg33_mni_bbr.FA_Avg.txt Done in 0.376 sec. dmri_group done /Applications/freesurfer/bin/dmri_group --list /Applications/freesurfer/subjects/subject_prova/stats/rh.cst_AS.avg33_mni_bbr.inputs.txt --ref /usr/local/fsl/data/standard/MNI152_T1_1mm_brain.nii.gz --out /Applications/freesurfer/subjects/subject_prova/stats/rh.cst_AS.avg33_mni_bbr
cwd /Applications/freesurfer/subjects/subject_prova cmdline /Applications/freesurfer/bin/dmri_group --list /Applications/freesurfer/subjects/subject_prova/stats/rh.cst_AS.avg33_mni_bbr.inputs.txt --ref /usr/local/fsl/data/standard/MNI152_T1_1mm_brain.nii.gz --out /Applications/freesurfer/subjects/subject_prova/stats/rh.cst_AS.avg33_mni_bbr sysname Darwin hostname iMac-di-Stefano.local machine x86_64 user Stefano Base name of output files: /Applications/freesurfer/subjects/subject_prova/stats/rh.cst_AS.avg33_mni_bbr Text file with list of individual inputs: /Applications/freesurfer/subjects/subject_prova/stats/rh.cst_AS.avg33_mni_bbr.inputs.txt Loading output reference volume from /usr/local/fsl/data/standard/MNI152_T1_1mm_brain.nii.gz Loading list of inputs from /Applications/freesurfer/subjects/subject_prova/stats/rh.cst_AS.avg33_mni_bbr.inputs.txt Loading measures along the path from/Applications/freesurfer/subjects/subject_prova/Control01/dpath/rh.cst_AS_avg33_mni_bbr/pathstats .byvoxel.txt Loading input reference volume from /Applications/freesurfer/subjects/subject_prova/Control01/dmri/dtifit_FA.nii.gz Loading affine registration from /Applications/freesurfer/subjects/subject_prova/Control01/dmri/xfms/diff2mni.bbr.mat Segmentation fault
----Messaggio originale---- Da: ayendiki@nmr.mgh.harvard.edu Data: 27-dic-2013 13.50 A: stdp82@virgilio.it Cc: freesurfer@nmr.mgh.harvard.edu Ogg: Re: [Freesurfer] Tracula -stat
Hi Stefano - As always, it'll be impossible to guess what's causing the error without seeing at least the log from the command and the configuration file.
a.y
Hi list,
I'm performing -stat step but this command produces sementation fault after loading affine registration .mat. Thanks,
Stefan _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
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