Hi Hengameh
You can try, but 3mm may be too thick for accurate surface models. Once you have too many voxels that contain both sides of a sulcus it is difficult to recover accurate surfaces. Note that our inputs don’t have to be mprage, but 3D acquisitions are highly recommended
Cheers Bruce
From: freesurfer-bounces@nmr.mgh.harvard.edu freesurfer-bounces@nmr.mgh.harvard.edu On Behalf Of Hengameh Marzbani Sent: Friday, July 17, 2020 8:23 AM To: Freesurfer support list freesurfer@nmr.mgh.harvard.edu Subject: [Freesurfer] The input for FreeSurfer
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Hello Freesurfer developers,
I have T1 weighted MRI images which are not MPRAGE. They are 2 dimensional sagittal or axial images with 3mm thickness (1.5 Tesla).
Can I analyze these images by FreeSurfer?
If yes, what tips should I consider?
Thank you in advance,
Best regards,
Hengameh