27 May
2010
27 May
'10
5:52 a.m.
Dear Freesurfer experts,
We are attempting to segment a template monkey brain.
The following is the command line input:
recon-all -i /usr/local/freesurfer/subjects/template_2/mri/orig/MonkTempl_w81096_T1.nii.gz -s template -all -notal-check -force -noaseg
It runs for a few hours and then we get the following error:
"cannot find seed region for corpus collosum"
Do we have to manually mark this somehow in tkmedit?
Any advice would be appreciated!
Thank you,
Jason.