22 Feb
2019
22 Feb
'19
10:37 a.m.
Hi Sadia
we don't align to AC-PC, but we do compute a talairach transformation in $SUBJECTS_DIR/$subjects/mri/transforms/talairach.xfm that should do so. You can apply it using mri_convert or mri_vol2vol.
cheers Bruce
On Fri, 22 Feb 2019, Sadia Sheikh wrote:
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Hello Freesurfer experts Freesurfer preprocessed data by(recon-all) are ACPC aligned? If not how can I align my files to ACPC? I read the documents but I am still very confused about the alignment and coordinate system in freesurfer.
Thanks in advance
Regards Sadia Research Student