Re: [Freesurfer] lh.orig.nofix vs. lh.white

lh.orig.nofix is the original tesselation without anything done to it. To get to lh.white, the defects are automatically corrected to create lh.orig. lh.orig is then refined with smoothness and intensity constraints to produce lh.white doug

On 09/04/2013 07:07 PM, David Romano wrote:

Hi everyone,

I've been trying to go through the various steps described on the page:

http://surfer.nmr.mgh.harvard.edu/fswiki/ReconAllDevTable

and I'm trying to understand part of the -autorecon2 section, and in particular,

1. how the lh.orig.nofix file that is produced by the end of the

-tessellate subsection is different from the the lh.white file that is produced by the -white subsection, and

2. whether the area and curvature files produced by the command

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