Re: [Freesurfer] intrareg: Undefined variable

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Never mind. Solved it.

On Mon, Sep 26, 2022 at 1:16 PM miracle ozzoude miracooloz@gmail.com wrote:

Hello,

I am trying to run TRACULA using FreeSurfer version7.2. I followed the instructions on the tutorial website for cross-sectional study with 1 scan (see link below). However, I keep getting "intrareg:Undefined variable" error whenever I run the first step "trac-all -prep -c tracula.file".

I checked my config file and I did set intrareg = 3. Any suggestions on what the issue is/how to fix it? I have attached my config file in the email below, in addition to the log file. The participants' recon-all were processed using freesurfer v6.0

Many thanks, Paul