Try following this tutorial. It is for fmri, but you can probably apply it to PET surfer.nmr.mgh.harvard.edu/fswiki/FsTutorial/MultiModalFmriGroup_freeview Also see you PET module: surfer.nmr.mgh.harvard.edu/fswiki/FsTutorial/MultiModalFmriGroup_freeview
On 11/20/2018 06:34 PM, john Anderson wrote:
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Dear Freesurfer experts, I would like to run surface based paired t test of PET data on surface. For every subject I have visit pre treatment and post treatment. I tried to follow the instructions here https://surfer.nmr.mgh.harvard.edu/fswiki/PairedAnalysis%C2%A0but the toturial seems to be for cortical thickness data. How can i modify the command mris_preproc to do paired test of PEt data on brain surface mris_preproc --target fsaverage --hemi lh \ --meas thickness --out lh.paired-diff.thickness.mgh \ --fsgd pairs.fsgd --paired-diff thanks for any suggestion John
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