Thank you, Jenni! It's working now.
K
Jenni Pacheco wrote:
Hi Katie,
It's actually writing to /tmp, on 'whatever', which appears to be full. You should clear out some space on that so that selxavg can write it's little temporary files and then everything should be fine!
whatever:jpacheco[/homes/3/jpacheco] cd /tmp/ whatever [tmp] df -h . Filesystem Size Used Avail Use% Mounted on /dev/hda2 5.8G 5.5G 0 100% / whatever [tmp]
Jenni
-----Original Message----- From: freesurfer-bounces@nmr.mgh.harvard.edu [mailto:freesurfer-bounces@nmr.mgh.harvard.edu] On Behalf Of Kathryn Devaney Sent: Wednesday, April 04, 2007 10:59 PM To: freesurfer@nmr.mgh.harvard.edu; help Subject: [Freesurfer] erroneous 'no space left on device' error
Hi all,
I am trying to run an analysis in /space/stego/2/ (on machine 'whatever') and I can run mkanalysis, but when I try to run selxavg, I get the following error, in both std and dev environments:
whatever:subj27/mystudy% selxavg-sess -sf sessid -df sesspar -analysis m4_fmc -noomnibus INFO: WhitenFlag = 0
selxavg-sess logfile is /autofs/space/stego_002/users/kdevaney/m4/subj27/mystudy/log/selxavg-sess-bo ld-m4_fmc-070404224944.log
/autofs/space/stego_002/users/kdevaney/m4/subj27 Wed Apr 4 22:49:45 EDT 2007 INFO (subj27): RunList = 003 004 005 007 008 009 010 011 012 013 014 015 cp: writing `/tmp/par.11619': No space left on device cp: writing `/tmp/par.11619': No space left on device cp: writing `/tmp/par.11619': No space left on device cp: writing `/tmp/par.11619': No space left on device cp: writing `/tmp/par.11619': No space left on device cp: writing `/tmp/par.11619': No space left on device cp: writing `/tmp/par.11619': No space left on device cp: writing `/tmp/par.11619': No space left on device cp: writing `/tmp/par.11619': No space left on device cp: writing `/tmp/par.11619': No space left on device cp: writing `/tmp/par.11619': No space left on device cp: writing `/tmp/par.11619': No space left on device cat: /tmp/countncond.11619: No such file or directory
however:
whatever:subj27/mystudy% df . -h Filesystem Size Used Avail Use% Mounted on bronto:/local_mount/space/stego/2 63G 5.7G 57G 10% /autofs/space/stego_002
There is clearly plenty of space left.
Any help is appreciated, thanks!
Katie
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