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Hi,
I followed mri_annotation2label and mris_label2annot to create my ROIs annotation for lh.white view. No errors were made, however, 2 problems occurs (attached the freeview output): 1) the nearby regions (middletemporal & superiortemporal) are of similar color (orange vs. red), can I change the color using commands so that I can separate the nearby area more.
2) I also incorporate the entorhinal into the annotation, however, it doesn't show in 2D. However, when I also load orig.mgz, I can see it from a 3d in green (also attached). So it is possible that I make it visible in 2D for all my ROIs or an alternative for loading orig.mgz?
3) I went through some papers and graphs, their surface display for ROIs seems to be more soft on edges thanmine. I am sure it is not lh.white, lh.inflated or lh.pial. what do you think they load (attached lh.white_alternative1, 2,3) Thank you so much!
Best, Qi
